Protein SDHA

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
C34B2.7.1	pdb,2h89,A,#1	27	640	0	72.476
C03G5.1	pdb,2fbw,N,#1	35	646	0	73.366
ENSACAP00000009495	pdb,3ae2,A,#1	52	664	0	92.17
ENSXETP00000026401	pdb,3ae9,A,#1	52	665	0	82.792
ENSXETP00000026401	pdb,3aec,A,#1	52	665	0	82.792
ENSCAPP00000000571	pdb,3aed,A,#1	45	414	0	97.838
ENSGALP00000021475	pdb,2wdq,E,#1	62	665	0	51.888
ENSDARP00000018027	pdb,1zp0,A,#1	49	661	0	86.786
FBpp0085737	pdb,2wu2,A,#1	59	601	0	55.273
ENSMFAP00000011190	pdb,2wdq,E,#1	61	582	0	55.128
FBpp0085737	pdb,3vr8,E,#1	51	661	0	70.915

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.3	0.464	0.235	0.563	0.318	0.119

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.689695550351288	0.0468384074941452	0.022248243559719	0.00117096018735363	0.00234192037470726	0.00117096018735363	0.00117096018735363	0.23536299765808

Loading ...

Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.685513345 0.314332816 1.059360405 0.307335215 0.346993090 2.279030120 0.268792280 0.901607067 2.307169905 3.738774567 0.075138975 0.535491119 1.022912587 1.802425001 2.532371771 0.050518479 0.537399911 1.030858448 1.585532115 4.628092648 4.446239816 0.000000008 0.223213984 0.883671560 1.095518678 1.086105699 7.586189550 3.123277559 0.138112186 0.170721471 0.339944414 0.749960354 2.042994636 4.004129130 2.777897540 7.029055241 0.000000010 0.035890650 0.249043594 0.356242539 1.031227585 2.372740499 2.489093467 3.430024113 4.667704069 0.037728836 0.058971131 0.565746148 0.255383598 0.504479054 1.729825719 1.106483126 1.708912965 4.493549919 9.445611509 0.000000002 0.092603434 0.357048160 0.455283284 0.231043980 1.992713655 0.411256566 1.368341462 2.843549723 2.626180351 7.116125009 0.000000002 0.051073319 0.000000063 0.011594838 0.409274733 0.049354974 0.132015658 0.827431726 1.572842549 1.106231117 2.997432460 9.719494860 0.000000002 0.060877293 0.038906556 0.104226848 0.461615564 0.000003753 0.379097607 0.564618725 1.109786776 2.417017891 2.215203775 1.307978095 9.569693656 0.000000002 0.104158385 0.185997695 0.000000001 0.480365497 0.005379862 0.827275871 0.082064526 0.784158742 0.017805840 2.614018213 1.100639087 3.057257465 8.714963501 0.000000002 0.017556822 0.042779513 0.324219398 0.000140981 0.796000459 0.515140424 1.444960885 0.000022263 1.878165993 2.735225285 0.371115915 0.797359805 0.273025933 6.735224340 0.000000002 0.073518150 0.000000001 0.000000001 0.325298158 0.000000046 0.598634919 0.393870359 0.320043328 1.175352093 0.043109172 0.000000007 0.775709345 2.868976952 1.134034315 20.332109113 0.702577013 0.238296441 0.653119205 0.579369421 0.000000001 0.000000002 0.851314445 0.000000007 0.286360443 0.401502136 0.000023570 1.125144095 0.000000019 3.149914943 0.000000009 5.175823454 4.609540391 0.000000002 0.018178119 0.000000001 0.172758263 0.274675613 0.000000019 0.000000278 0.350042006 1.459015396 0.205620223 0.517110621 2.922024804 0.000224095 1.475304876 0.000000009 0.000000011 0.000000011 6.755633421 0.000000002 0.030992308 0.000000001 0.000000003 0.000030907 0.489299879 0.032626548 0.189750690 0.484323183 0.904486518 0.897937132 0.528798983 1.383878716 1.826262032 0.000000009 0.000000011 3.586966953 20.752326402 4.954941417 0.048102200 0.266137000 0.092324800 0.081344300 0.074725600 0.049695700 0.064479700 0.045826500 0.050960600 0.052791500 0.039609900 0.042419900 0.032558200 0.013931900 0.010537600 0.008982590 0.008856870 0.002437240 0.006787830 0.007489610