Protein SDHAF4

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSGALP00000057547	pdb,2k5k,A,#1	70	95	9.37e-07	73.077
ENSFALP00000007280	pdb,2k5k,A,#1	61	86	9.61e-07	73.077

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.066	0.067	0.867	0	0.178	0.822

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.148148148148148	0.259259259259259	0.0432098765432099	0	0	0.00617283950617284	0.00617283950617284	0.537037037037037

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

1.689280555 15.232018654 7.620592770 20.556048412 0.963495071 5.710421760 106.323075722 0.365773021 0.561265281 4.691675750 14.243723511 0.062878257 0.002883833 0.625967703 0.655932802 23.163480973 1.137565251 0.123475550 1.319257018 3.505673681 2.991657007 164.450935640 0.374593837 0.391013142 0.265153863 0.574614530 6.842666530 0.544311341 5.102451347 0.295276774 0.047855287 0.070925199 0.045633995 0.802799287 1.089007951 2.736924319 12.710958989 0.000000757 0.228792787 0.001433704 0.000051968 0.281120145 0.005483680 1.028558443 3.686631282 34.624652987 0.025209978 0.000773064 0.002162489 0.332587546 0.040675320 0.001293290 0.717130800 0.409771662 5.224567544 0.001483271 0.000000001 0.000000002 0.000000001 0.000000001 0.010080982 0.000000053 0.056089041 0.288335642 0.029284344 6.114651534 0.023318771 0.032619524 0.018368888 0.000000001 0.000000001 0.243653327 0.000353167 0.187797943 0.179455850 0.138881280 0.000134446 4.182442380 0.000015927 0.000000013 0.052806693 0.039268231 0.000000001 0.000000013 0.004344295 0.000000002 0.000201686 0.009600479 0.000000001 0.000000004 7.034319872 0.000015927 0.000000001 0.000000002 0.000000001 0.000000001 0.000000267 0.000000001 0.000000001 0.000000042 0.000000002 0.000000001 0.000001355 0.000071746 7.417199122 0.001103796 0.001269142 0.001322518 0.000000022 0.000000050 1.123839122 0.835392548 0.000000001 0.000021344 0.248310280 1.615988831 0.000820599 0.014392652 0.049761368 24.158010481 872.527111979 0.000000041 0.694332213 0.000542538 5.639941176 0.000109353 0.000009221 3.493187658 0.000001987 0.119683880 1.611418061 0.729662234 0.000051541 0.000000001 0.000000003 0.000000026 0.000015927 0.000000001 0.000000002 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000036536 0.000000281 8.106011394 2.240459175 0.000000148 0.000000024 7.123639742 0.043453620 0.000000040 1.201575513 84.474975290 11.408588020 3.087688506 0.971973876 0.000965216 0.119181095 0.032708507 0.329528227 0.000026206 0.052029491 0.000000001 0.000307078 0.000000658 0.000000003 0.005820281 0.000000241 0.000000095 17452.803893868 0.128115210 9.014853301 7.591447878 15.431899768 9.961135960 15.636614746 85.124634305 4.317042041 28.008024158 9.559834843 0.007059108 0.057516956 0.000010768 0.000000003 0.000991068 41.008977920 0.000000095 0.743440956 0.000006279 0.066875900 0.065440000 0.086144700 0.077859500 0.074361800 0.075012400 0.067986900 0.064247000 0.065203100 0.072197900 0.083889500 0.085737500 0.077064400 0.029920800 0.003837770 0.002480530 0.001053150 0.000496147 0.000184858