Protein SLC25A25

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSXETP00000016859	pdb,4n5x,A,#1	58	212	1.07e-59	58.065
ENSPSIP00000020273	pdb,4n5x,A,#1	45	198	1.56e-58	58.442
ENSMPUP00000013366	pdb,4n5x,A,#1	54	208	1.66e-57	58.065
ENSLOCP00000007376	pdb,4n5x,A,#1	77	230	2.33e-57	56.494
ENSONIP00000014225	pdb,4n5x,A,#1	81	234	2.42e-57	55.195
ENSCPOP00000032494	pdb,4n5x,A,#1	48	211	1.95e-56	55.488
ENSORLP00000016129	pdb,4n5x,A,#1	75	228	3.42e-56	54.545
ENSDARP00000088935	pdb,4n5x,A,#1	70	223	1.09e-55	55.195
ENSGACP00000024400	pdb,4n5x,A,#1	59	224	3.51e-55	53.614
ENSGMOP00000009432	pdb,4n5x,A,#1	53	217	1.23e-54	52.727
ENSLAFP00000004258	pdb,4n5x,A,#1	48	213	3.03e-54	53.614

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.137	0.176	0.687	0.309	0.484	0.208

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.522464698331194	0.0834403080872914	0.0359435173299101	0.0256739409499358	0.0231065468549422	0.0192554557124519	0.0372272143774069	0.252888318356868

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

4.216288904 0.011358882 1.715913562 0.091190380 0.000022209 8.599466264 7.114852055 0.049238618 0.000748360 7.993348705 15.147892124 0.017203110 0.299463364 0.037638458 0.066701077 1.159853439 0.079164761 0.190909091 0.236486442 5.623122722 6.701522002 3.343160855 0.002820196 0.067985438 0.000418729 0.532952416 6.483750785 0.023634153 2.246165562 0.033736401 0.000746280 0.128801239 0.697996202 0.734473463 0.016696484 6.401792929 1.078036129 0.001335632 0.115428004 0.007776716 0.040620977 0.275831688 0.477360987 0.001159920 8.783067825 0.200274269 0.027177906 0.000002181 0.109855844 0.252032591 0.003334668 0.449738081 0.000109187 0.000461253 9.237742401 12.629359010 0.028066530 0.000040336 0.134697535 0.171755037 0.131741314 0.012945605 0.329456422 0.279161867 0.124122243 8.185485561 1.160359372 0.000000001 0.007989615 0.000041310 0.248596122 0.415918528 0.066061431 0.000013720 0.253235244 0.027690414 0.011558007 9.924177342 0.000260855 0.000000001 0.000000001 0.000000002 0.012129504 0.000636421 0.152468897 0.000227589 0.000141029 0.000013377 0.001779442 0.000000453 15.066349501 0.000000533 0.000000001 0.000000001 0.000000002 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000122 0.000000005 15.788364631 6.886809535 0.374591899 0.000014767 0.885972810 0.004566026 0.000134665 0.000007853 4.177793314 0.050124725 1.631428106 0.023725997 4.273506082 3.057089891 0.000005770 65.695645948 0.000007426 0.000000001 0.000000001 0.000000002 0.000000001 2.159551393 1.014598907 0.000000001 0.610694959 2.588708481 0.000000001 0.000000001 0.000000002 0.000000005 0.000000035 0.000000052 0.000247215 0.000000001 0.000667323 1.414169385 2.096295753 1.344608200 0.000009575 0.000000803 5.167877695 0.376075482 0.000000001 0.000000001 0.000000002 0.000000005 0.000000035 0.000000103 336.035152535 0.000000533 0.000000001 0.000000001 0.000000002 0.000000340 0.000000024 1.156641350 0.000000001 0.000000001 0.000000001 0.001040283 0.000000001 0.000000374 0.000000005 0.002734482 0.000000052 0.000000106 0.000000094 0.000000533 0.000000001 0.000000001 0.000000002 0.000000001 0.000000001 0.000000004 0.000000001 0.000000001 0.000000005 1.146611342 0.000000764 5.217421118 0.000202441 69.269132577 0.000000252 0.000000106 0.000000094 794.008075954 0.000187772 0.188066000 0.068948000 0.060198800 0.080402300 0.075932900 0.085465300 0.078954600 0.082822200 0.068074100 0.066805200 0.070889100 0.042291200 0.020975700 0.002863310 0.001919400 0.000946276 0.001067350 0.001106990 0.002083760