Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein IDStructureStartEndE valueBit score
ENSSTOP00000015873pdb,2lck,A,#1463137.17e-1325.424
ENSMODP00000038162pdb,2lck,A,#1562262.63e-1225.556
ENSLOCP00000019013pdb,2lck,A,#1642416.95e-1226.178
ENSCSAVP00000004842pdb,2lck,A,#1783309.91e-1222.826
ENSCSAVP00000004842pdb,2lck,A,#1622383.64e-1127.368
ENSORLP00000012523pdb,2lck,A,#1602323.8e-1126.087
F01G4.6b.2pdb,2lck,A,#1462704.7e-1123.81
ENSDARP00000111699pdb,2lck,A,#1772497.31e-1126.087
ENSANAP00000032229pdb,2lck,A,#1413088.35e-1125.085
ENSLACP00000016682pdb,2lck,A,#1832389.74e-1127.16
ENSMLEP00000013483pdb,2lck,A,#1692451.21e-1024.211

Alignment variation features

Conservative sites proportionIntermediate sites proportionVariable sites proportion Conservative sites heterotachy weightIntermediate sites heterotachy weightVariable sites heterotachy weight
0.0410.1120.8470.0990.6290.272

Site diversity ≤ 0.1250.125 < Site diversity ≤ 0.250.25 < Site diversity ≤ 0.375 0.375 < Site diversity ≤ 0.50.5 < Site diversity ≤ 0.6250.625 < Site diversity ≤ 0.75 0.75 < Site diversity ≤ 0.875Site diversity > 0.875
0.4638989169675090.1444043321299640.03068592057761730.01263537906137180.00361010830324910.001805054151624550.001805054151624550.34115523465704

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V



Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)