Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein IDStructureStartEndE valueBit score
ENSORLP00000017524pdb,2lck,A,#1133084.49e-2026.403
ENSPFOP00000007515pdb,2lck,A,#193041.03e-1925.743
ENSTNIP00000017332pdb,2lck,A,#183033.55e-1926.087
ENSXMAP00000008381pdb,2lck,A,#193043.83e-1926.403
ENSGMOP00000002002pdb,2lck,A,#183034.79e-1926.756
ENSLOCP00000005068pdb,2lck,A,#183051.13e-1826.246
ENSDARP00000004962pdb,2lck,A,#183031.36e-1826.421
ENSGACP00000007371pdb,2lck,A,#183032.58e-1826.087
ENSTRUP00000000559pdb,2lck,A,#193042.72e-1826.403
ENSTRUP00000020551pdb,2lck,A,#1103053.98e-1825.084
ENSPSIP00000006708pdb,2lck,A,#132911.87e-1728.146

Alignment variation features

Conservative sites proportionIntermediate sites proportionVariable sites proportion Conservative sites heterotachy weightIntermediate sites heterotachy weightVariable sites heterotachy weight
0.0930.1930.7140.1950.4460.359

Site diversity ≤ 0.1250.125 < Site diversity ≤ 0.250.25 < Site diversity ≤ 0.375 0.375 < Site diversity ≤ 0.50.5 < Site diversity ≤ 0.6250.625 < Site diversity ≤ 0.75 0.75 < Site diversity ≤ 0.875Site diversity > 0.875
0.4622302158273380.1061151079136690.003597122302158270.001798561151079140.0089928057553956800.003597122302158270.413669064748201

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V



Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)