Protein STARD7

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSPPYP00000009274	pdb,1ln1,A,#1	8	210	2.31e-153	99.507
ENSCCAP00000020294	pdb,1ln1,A,#1	8	210	1.98e-145	94.089
ENSPTRP00000083690	pdb,1ln1,A,#1	8	194	7.15e-140	99.465
ENSOCUP00000007734	pdb,1ln1,A,#1	8	210	2.14e-137	88.67
ENSTSYP00000027704	pdb,1ln1,A,#1	8	210	2.72e-137	88.67
ENSMLUP00000002329	pdb,1ln1,A,#1	9	211	5.78e-136	87.192
ENSHGLP00100019204	pdb,1ln1,A,#1	5	207	2.44e-133	83.744
ENSANAP00000021043	pdb,1ln1,A,#1	8	194	1.02e-132	94.118
ENSCHOP00000005057	pdb,1ln1,A,#1	8	210	1.07e-132	84.729
ENSMNEP00000024908	pdb,1ln1,A,#1	8	194	5.28e-131	93.583
ENSNGAP00000017544	pdb,1ln1,A,#1	8	210	9.53e-131	83.251

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.017	0.04	0.943	0.027	0.197	0.777

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.162481536189069	0.181683899556869	0.051698670605613	0.0768094534711965	0.0428360413589365	0.0147710487444609	0.017725258493353	0.451994091580502

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.072069109 0.000000013 1.603927395 0.000998635 0.000879315 3.708495911 0.202976992 0.102432491 0.059957364 5.642402546 0.000000013 0.092636327 0.120694403 0.097402788 0.199012673 0.068665398 0.106626998 0.304021824 0.539310940 4.846326881 7.861707691 0.000000013 0.026368661 0.094454648 0.095540245 0.138126617 6.899334119 0.135783934 0.000000013 0.005679650 0.066462199 0.131750172 0.404821320 1.442380390 0.074681716 8.798109184 0.000000013 0.074008760 0.027493162 0.004993644 0.075889434 0.209645441 0.170448662 0.092261076 7.398543356 0.000000013 0.002665178 0.039810087 0.000388871 0.003279405 0.269637371 0.241534591 0.213440002 0.538132873 6.217068948 0.000000013 0.006491240 0.015413571 0.026350411 0.074839688 0.135001362 0.116395705 0.123527236 0.430277578 0.284607086 7.159073702 0.000000013 0.005929866 0.000825112 0.001122791 0.002280453 0.097724992 0.130827412 0.086201220 0.505413501 0.197112104 0.712472618 8.391135520 0.000000013 0.000000036 0.052827459 0.001964875 0.110814842 0.217240942 0.024284859 0.000005795 0.089015512 0.001415684 0.061377081 0.170196473 11.607764103 0.000000013 0.011140192 0.015600263 0.215934013 0.022361122 0.063958372 0.188574531 0.000018873 0.584266814 1.001334805 0.001915196 0.141873608 2.253996517 12.295607765 0.000000013 0.000000001 0.000000001 0.000000001 0.000000001 0.124736801 0.005706129 0.034027080 0.000473387 0.014432959 0.000064206 0.132920328 0.107684075 0.010306534 9.197487031 0.000000013 0.017710534 0.000000001 0.000000001 0.153019838 0.000007499 0.052017453 0.000013767 0.000000658 0.091773635 0.000000001 0.000000002 0.148184984 0.144777410 3.032238262 0.747814750 0.000000013 0.029497106 0.000000001 0.000000001 0.173770106 0.000000050 0.044818461 0.000000001 0.000000001 0.000000001 0.000000001 0.000000003 0.134142290 0.000000006 0.000039829 1.355425245 10.301974976 0.000000013 0.000000081 0.000000001 0.000000001 0.096772078 0.000130097 0.000001527 0.311777337 0.925346318 0.000033800 0.541307881 0.002785860 0.898818166 0.668134135 10.988908792 0.215383707 0.000001714 19.449662790 0.000000013 0.006093358 0.048295964 0.000000498 0.023204833 0.009823981 0.197937628 0.000000287 0.000000081 0.080022832 0.081904458 0.000000390 0.256747608 0.975107518 0.376959057 0.264732951 0.000071719 0.606491720 8.952742334 0.007770930 0.129908000 0.085702400 0.074414400 0.075618300 0.068645900 0.071461400 0.067061000 0.072577800 0.079712000 0.079248800 0.064640000 0.051107000 0.027530400 0.006548430 0.009648780 0.007043630 0.005647810 0.003742250 0.011970900