Protein SUCLA2

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSMODP00000004026	pdb,2fp4,B,#1	147	540	0	92.893
ENSCSAVP00000011073	pdb,1euc,B,#1	35	427	0	67.939
ENSLOCP00000012442	pdb,2fpg,B,#1	34	435	0	84.826
ENSPEMP00000018518	pdb,1eud,B,#1	20	414	0	92.405
ENSOANP00000002184	pdb,2fpi,B,#1	1	284	0	90.141
ENSCINP00000015047	pdb,2fpi,B,#1	36	430	0	68.354
ENSCSAVP00000011073	pdb,2fpp,B,#1	36	427	0	68.367
ENSGACP00000012380	pdb,2fpg,B,#1	37	428	0	84.184
ENSONIP00000025646	pdb,1euc,B,#1	8	400	0	84.478
ENSCINP00000015047	pdb,1euc,B,#1	35	430	0	67.929
ENSCHOP00000003671	pdb,2fpg,B,#1	38	429	0	84.184

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.065	0.155	0.78	0.171	0.614	0.215

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.211428571428571	0.188571428571429	0.0266666666666667	0.00761904761904762	0.00476190476190476	0.0019047619047619	0.0019047619047619	0.557142857142857

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.611065342 0.199233674 2.201583602 0.210231289 0.103706227 6.032778789 0.157174798 0.219111988 0.316153297 4.725012014 0.011135851 0.060339429 0.270134300 0.375692205 0.457495056 0.522216965 0.315657344 0.297019767 1.185504953 4.423890791 5.713449410 0.104824329 0.000628995 0.080525521 0.001318046 0.113123209 7.596000517 0.299303084 0.000000009 0.015158838 0.159912762 0.122971908 0.204746099 0.911436261 0.458592491 7.902598548 0.000000009 0.041551512 0.057649215 0.039825505 0.097490178 0.657327597 0.299156019 0.113414747 8.545109362 0.032405392 0.011378511 0.000000386 0.000000008 0.259609370 0.265442208 0.112945408 0.131527959 0.197110264 7.610046186 0.000000009 0.003285084 0.033268136 0.026064795 0.052741378 0.107773540 0.248579939 0.148172458 0.097097418 0.526753904 7.596783206 0.000000009 0.031161049 0.058300339 0.021352914 0.120789448 0.054141826 0.364747649 0.225353986 0.265060727 0.009293562 0.075885977 8.305460902 0.000000009 0.021680471 0.000000001 0.000000042 0.001521792 0.182319576 0.815573832 0.027454915 0.000000555 0.536707282 0.187202296 0.000098716 9.664181238 0.000000009 0.065146409 0.342114322 0.000113541 0.683343352 0.000002194 0.196725243 0.000000001 0.590864755 0.993209174 0.263733293 0.768323079 3.084371113 0.393156051 0.000000009 0.026981714 0.000000169 0.000000003 0.563099252 0.000000120 0.268601296 1.044830518 0.000002410 0.000000072 1.080776259 0.752890242 0.000000030 1.417680046 7.408296847 0.000000009 0.047247281 0.000000001 0.000000001 0.073489707 0.212715549 0.352437334 0.006763121 0.000000001 0.000000002 0.868387828 0.000000022 0.532041292 0.000000012 0.000000029 3.166056915 0.000000009 0.000030782 0.000000001 0.000000001 0.985355740 0.000018262 0.050058357 0.660014399 0.000000001 0.000000085 0.357493015 0.001358925 0.005786878 0.000000012 18.650861753 0.000000029 46.801044509 0.000000009 0.000000001 0.000000001 0.000000001 0.027681834 0.000000001 1.007456255 0.000000001 0.001349736 1.092472254 0.000000027 0.271381193 0.000000144 0.000000012 0.000001981 0.000000029 0.000000029 0.080207909 0.000000009 0.000001806 0.000000001 0.430613504 0.000005884 0.000000002 0.326491251 0.000000008 0.159577757 0.481324808 1.140658461 0.018816588 4.895161636 0.021683209 8.458654874 4.312727210 3.329372414 48.359833422 41.427257886 0.010778700 0.167340000 0.082211700 0.074706900 0.114789000 0.083530800 0.106756000 0.069169400 0.066947300 0.059477300 0.066215000 0.043932300 0.027976400 0.008625430 0.003414550 0.003454960 0.003408300 0.001596850 0.002664550 0.003005090