Protein SYNJ2BP

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSSBOP00000024665	pdb,2eno,A,#1	1	107	1.02e-72	99.065
ENSCAFP00000024448	pdb,2eno,A,#1	1	113	1.05e-72	93.805
ENSTTRP00000011958	pdb,2eno,A,#1	1	107	2.54e-71	97.196
ENSCATP00000033366	pdb,2eno,A,#1	1	107	3.2e-71	98.131
ENSDORP00000009821	pdb,2eno,A,#1	1	107	8.32e-71	97.196
ENSCGRP00000011885	pdb,2eno,A,#1	1	107	1e-70	96.262
ENSMPUP00000007436	pdb,2eno,A,#1	1	113	1.09e-70	92.035
ENSSTOP00000012931	pdb,2eno,A,#1	1	107	1.59e-70	97.196
ENSOARP00000004591	pdb,2eno,A,#1	1	109	1.91e-70	94.545
ENSSSCP00000020070	pdb,2eno,A,#1	1	107	3e-70	95.327
ENSPEMP00000001562	pdb,2eno,A,#1	1	107	2.51e-69	95.327

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.035	0.171	0.793	0.209	0.325	0.467

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.461904761904762	0.219047619047619	0.0142857142857143	0.0428571428571429	0.019047619047619	0.0142857142857143	0.0238095238095238	0.204761904761905

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.982601075 0.076059079 2.936047953 0.000000105 0.492115916 7.130155637 0.000000052 0.084746147 2.827664363 6.030343618 0.000000006 0.274737702 0.727553954 0.658102874 1.394112080 0.000000006 0.380133283 0.222852459 1.219560363 4.401109438 5.614834556 0.000000006 0.003022342 0.137205619 0.076678319 0.336088821 6.567494617 1.608082287 0.000000006 0.001186523 0.006870075 0.002438286 0.175416245 3.503093129 0.028808877 5.976987067 0.000000006 0.028119257 0.318685069 0.018838574 0.141354864 1.273081243 0.030721542 1.343837291 4.251871000 0.000000006 0.008633361 0.094811656 0.000014272 0.071301120 0.198589432 0.063444996 0.404689973 1.136272190 4.202635907 0.000000006 0.000012807 0.010778682 0.000006967 0.000043471 0.047247493 0.296828329 0.277369086 1.355247750 1.516076353 4.730879466 0.000000006 0.035915220 0.000020097 0.161327041 0.000002009 0.044331835 0.227285022 0.020787635 0.222141932 0.349726052 0.636573590 9.245823396 0.000000006 0.000000001 0.251972994 0.000000091 0.000000067 0.000098306 0.069839833 0.000040182 0.428167890 0.017746994 0.623136731 0.708110364 6.863617569 0.000000006 0.000000001 0.000000008 0.000000054 0.000000056 1.083742263 0.000000103 0.232883536 0.293370493 0.000000645 0.000919323 0.165891964 1.934723977 4.403800550 0.000000006 0.000229885 0.010194988 0.080075531 0.000001816 0.000000209 0.000007632 0.203673637 0.000019625 0.000000696 0.107803650 0.000001926 0.000150508 2.008017606 3.446133517 0.000000006 0.000000001 0.000000001 0.000000001 0.000000002 0.000000001 0.000000003 0.000000002 0.000000002 0.000000990 0.004516545 0.972820736 0.000001866 0.579373771 1.458325931 6.002220534 0.000000006 0.000000001 0.000000001 0.000000001 0.286297458 0.000000001 0.232691921 0.000000002 0.000000002 0.171986603 0.671533161 0.000009851 0.000000016 0.457415826 0.000000006 0.000000007 8.800301846 0.000000006 0.000000001 0.373610955 0.000004181 0.079619598 0.000000002 0.533432947 0.000000002 0.000000091 1.191768290 0.000001668 0.000149568 1.221537522 0.778351152 0.000000006 5.915108800 3.314409651 5.799622025 0.000000006 0.000000001 0.000000001 0.000000001 0.323305597 0.303404149 0.084598005 0.000000466 0.519578781 0.093923166 0.194410166 0.709276970 0.878256120 0.002691321 0.452321333 0.359864672 0.000000010 0.297947404 3.963550311 0.015518200 0.108941000 0.068563300 0.071599900 0.060751500 0.067391300 0.069133900 0.058819100 0.060889900 0.068644300 0.095215700 0.071403700 0.052723800 0.038078700 0.018011200 0.015266600 0.010005100 0.015609500 0.006579480 0.026853700