Protein TACO1

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
YGR021W	pdb,1lfp,A,#1	32	286	1.38e-34	34.109
ENSHGLP00000026630	pdb,1lfp,A,#1	60	293	4.64e-34	31.818
ENSTNIP00000022117	pdb,1lfp,A,#1	58	287	2.54e-33	31.933
ENSSSCP00000048588	pdb,1lfp,A,#1	60	294	3.47e-33	31.687
ENSCAFP00000019068	pdb,1lfp,A,#1	64	298	4.88e-33	32.51
ENSAMEP00000003512	pdb,1lfp,A,#1	64	298	5.96e-33	32.099
ENSXETP00000007057	pdb,1lfp,A,#1	56	279	6.28e-33	38.095
ENSMODP00000012507	pdb,1lfp,A,#1	59	285	6.54e-33	33.191
ENSXMAP00000018415	pdb,1lfp,A,#1	60	291	6.67e-33	34.728
ENSCPOP00000013510	pdb,1lfp,A,#1	60	293	7.55e-33	31.967
ENSFCAP00000034596	pdb,1lfp,A,#1	63	297	8.24e-33	32.099

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.165	0.151	0.684	0.186	0.521	0.293

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.531615925058548	0.147540983606557	0.0257611241217799	0.00234192037470726	0	0	0.00702576112412178	0.285714285714286

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.036283152 0.169517293 2.613067309 1.151460861 0.002135073 6.560048649 1.113729304 0.014255410 0.065883794 6.036584334 1.390817934 0.032859385 0.336263560 0.158315600 0.453680439 4.285682598 0.157072765 0.015444799 1.015066990 4.903191885 5.807270424 5.874383606 0.077273741 0.297400579 0.491760575 0.183628327 6.100001124 0.236483730 0.234102866 0.005503272 0.040441081 0.006703655 0.165514610 1.002641996 0.250421421 6.549948519 0.021765034 0.000438782 0.103084114 0.000001962 0.004461744 0.045128421 0.025009718 0.063053570 5.237412562 13.003452375 0.046279239 0.000162845 0.000130541 0.003218928 0.075514377 0.081670676 0.049000492 0.000060589 4.550181253 0.126865960 0.000393559 0.032190269 0.011980180 0.000035693 0.118462371 0.131631612 0.067630653 0.197679314 0.041974094 5.823004513 0.000028583 0.016161124 0.000000002 0.063955826 0.000008917 0.076196425 0.000057399 0.003373227 0.032230483 0.280504451 0.011906717 7.056216194 0.000000104 0.000000001 0.000000002 0.000001926 0.104450028 0.000000027 0.000059423 0.000000001 0.000000001 0.132000509 0.061324065 0.000000002 11.504443807 0.000000057 0.318637685 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000004 0.000000002 0.000000003 16.135280573 0.394524545 2.412691605 0.054958236 0.135943471 4.266666667 5.376806145 0.470861316 0.017046167 3.565222679 0.006799911 0.010696317 0.001217784 6.778850238 54.807681207 0.000000341 16.539605622 4.929208018 0.031182861 0.018668701 3.092490229 6.890001761 3.838580253 0.018909366 0.048966297 0.032058422 0.009172232 0.086090121 0.000045848 0.000024582 0.000000067 73.667171016 0.000976487 0.000000001 0.001338405 10.519298625 0.000749048 0.120530498 0.001703389 0.194095167 0.000208672 0.000000141 0.000000004 0.000000005 0.000000006 0.000000006 0.000000067 0.000291036 0.000221663 0.000000057 0.000000001 0.000000001 0.000000001 0.000000001 0.268746619 0.000000001 0.000000001 0.267606276 0.000000001 0.000000002 1.478477286 0.000010617 1.715655526 26.616427830 0.000000207 0.000000274 0.000000534 0.000000242 0.000000001 0.000000001 0.000000019 1.173087661 0.000000001 0.000000296 0.000000001 0.000000001 0.000000001 0.222292090 2.546201383 1.585231375 0.000000006 0.000000067 0.000001738 0.000000274 0.000000534 74.987125833 0.001758210 0.116581000 0.083372400 0.088677300 0.107460000 0.080053100 0.103934000 0.081875300 0.085517800 0.077874700 0.058364200 0.054484300 0.037670400 0.015591300 0.001483580 0.000482470 0.000364852 0.000187142 0.002757460 0.001510380