Protein THNSL1

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
YCR053W	pdb,4f4f,B,#1	5	494	1.42e-121	42.449
YCR053W	pdb,4f4f,A,#1	5	494	1.42e-121	42.449
ENSPCOP00000025509	pdb,4f4f,B,#1	1	463	1.08e-96	38.462
ENSPCOP00000025509	pdb,4f4f,A,#1	1	463	1.08e-96	38.462
ENSMOCP00000024055	pdb,4f4f,A,#1	1	440	4.4e-95	38.009
ENSMOCP00000024055	pdb,4f4f,B,#1	1	440	4.4e-95	38.009
ENSMICP00000017023	pdb,4f4f,B,#1	1	463	1.32e-94	38.034
ENSMICP00000017023	pdb,4f4f,A,#1	1	463	1.32e-94	38.034
ENSTTRP00000013780	pdb,4f4f,B,#1	1	451	2.51e-94	37.445
ENSTTRP00000013780	pdb,4f4f,A,#1	1	451	2.51e-94	37.445
ENSECAP00000011226	pdb,4f4f,B,#1	1	463	9e-94	36.695

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.061	0.136	0.803	0.091	0.551	0.358

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.454444444444444	0.26	0.08	0.0388888888888889	0.00777777777777778	0	0	0.158888888888889

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.000000303 0.000109284 1.769152615 17.358347360 0.000099996 6.141680761 0.081485483 0.078875724 0.065239642 7.537233359 3.965023819 0.000000313 0.139886677 0.008845131 0.123363332 0.005394163 0.111511507 0.083835229 0.330666300 8.098156033 9.825960560 13.067224452 0.000036057 0.056205619 0.077977697 0.034104192 8.391415834 0.024725598 0.040685147 0.000331210 0.038504937 0.004409691 0.445438934 0.465220093 0.053590918 8.454598100 0.001314821 0.004987934 0.003090140 0.000000071 0.004299869 0.228194131 0.215001463 0.008707399 8.038880634 4.122671119 0.010365327 0.000000009 0.000001415 0.032688167 0.132325935 0.127578871 0.159310231 0.004589059 6.601353122 2.176119849 0.001488472 0.003496836 0.026523183 0.099811020 0.003991916 0.046728781 0.024092999 0.093245006 0.007187400 6.469934933 11.175590787 0.019029983 0.055290259 0.024026613 0.184475982 0.110312651 0.052257091 0.025162969 0.276534824 0.110631775 0.000015145 10.960117931 0.000243842 0.016556435 0.000000181 0.000000919 0.002550493 0.000002927 0.213291566 0.000000132 0.001106748 0.124785665 0.000028053 0.000000002 16.940155447 49.992186837 0.000000698 0.000000001 0.000000001 0.000000001 0.000219052 0.000000004 0.119756207 0.185538574 0.000254904 0.351393899 0.063523556 5.877095494 30.029649050 0.000454956 0.000000001 0.000000001 0.000000010 0.269322872 0.974204741 1.296582621 0.002269559 1.330149296 0.001633430 0.000000083 0.000000079 0.000001577 5.690083844 37.842902397 44.537706323 0.311231284 0.000000111 0.008100434 1.748457066 0.376220206 0.001450393 5.348280226 0.537950188 0.000351913 0.000001825 6.152085252 4.519830095 0.002948479 144.324628569 0.071700343 0.000000415 0.000355073 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 1.352202703 0.049426063 0.009520881 6.976697346 0.000131187 108.443129597 154.414952870 0.000571058 0.000352601 0.000000001 0.498758490 0.000225319 0.237093115 0.000000020 0.000002450 0.539946952 0.000015685 1.784821647 0.000000001 0.000000187 3.963932858 0.110299746 1.203127949 69.678657195 0.027655893 0.020964283 0.889082110 0.000000001 0.000000001 0.040677090 1.008730073 0.002977410 0.907801104 0.001922658 0.270315338 0.023386727 0.000000001 0.000000141 3.318216640 10.118948119 4.747866137 4.270706777 147.278151680 183.227665619 831.050745511 0.000447962 0.183069000 0.098267400 0.066915800 0.079426600 0.069691100 0.074507400 0.069936500 0.084798000 0.080539700 0.083467300 0.062205900 0.027803700 0.011366300 0.002913730 0.000633778 0.000712604 0.000660719 0.001024130 0.001612830