Protein TIMM10

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
YHR005C-A	pdb,3dxr,B,#1	15	83	7.34e-46	100
ENSCINP00000035196	pdb,3dxr,B,#1	10	72	5.51e-20	46.032
ENSCSAVP00000004262	pdb,3dxr,B,#1	10	72	2.79e-19	46.032
ENSLACP00000002759	pdb,3dxr,B,#1	10	72	5.42e-19	44.444
ENSGACP00000024393	pdb,3dxr,B,#1	20	82	1.28e-18	44.444
ENSDARP00000091094	pdb,3dxr,B,#1	10	72	1.6e-18	42.857
Y66D12A.22.3	pdb,3dxr,B,#1	6	72	1.77e-18	43.284
ENSOANP00000006050	pdb,3dxr,B,#1	10	72	1.86e-18	42.857
FBpp0071594	pdb,3dxr,B,#1	11	79	4.17e-18	43.478
ENSLOCP00000009614	pdb,3dxr,B,#1	10	72	4.29e-18	41.27
ENSXETP00000056932	pdb,3dxr,B,#1	10	72	5.03e-18	42.857

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.032	0.165	0.803	0.097	0.242	0.661

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.63963963963964	0.171171171171171	0	0.018018018018018	0.027027027027027	0.00900900900900901	0.108108108108108	0.027027027027027

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

2.172525530 0.000000013 4.682636653 0.000000013 0.000000002 5.327033303 0.000000013 0.000000002 0.005625666 6.797455017 0.000000013 0.000000002 0.000000002 0.265710447 0.025706587 0.000000013 0.000000002 0.000000002 0.000267333 5.783330930 11.054762533 0.000000013 1.031940483 0.000033686 0.021952372 0.000000001 16.137033320 0.914454529 0.000000013 0.000023033 0.000007641 0.453237702 0.000000001 0.828487662 0.000005962 6.278149752 0.000000013 0.000000002 0.000000268 0.000000001 0.321498262 0.347514862 0.000000190 0.065179080 6.010350400 0.000000013 0.000000002 0.000000002 0.000000001 0.000000001 0.189386785 0.000000002 0.115247890 0.048914036 6.468856089 0.000000013 0.000000002 0.000000002 0.189075209 0.000000001 0.000000002 0.000000002 0.167787839 0.635409159 0.000961687 2.634334507 0.000000013 0.000000002 0.000013888 0.142686696 0.000000001 0.000000002 0.000000002 0.000000002 0.012169779 0.507127367 0.269688601 7.901652576 0.000000013 0.000000002 0.223447791 0.000000001 0.000000001 0.000000002 0.000000002 0.000000002 0.558103486 0.000000001 0.000000001 0.000000001 6.259846627 0.000000013 0.000000002 0.000000002 0.000000001 0.000000001 0.000000002 0.000000002 0.000000002 0.000000107 0.000000001 0.000000009 0.000033370 2.827290591 19.932427348 0.000000013 0.000000002 0.000000003 0.000000741 0.000000140 0.078075261 0.000011294 0.000114256 0.000207325 0.883906921 0.000011093 2.072193424 0.115861026 8.639475972 0.095578802 0.000189717 0.057084114 0.000002947 0.000000001 0.000000001 0.000000003 0.000000002 0.000001271 2.598288513 0.069320937 2.020826353 0.000016897 0.000000017 0.000000002 0.000000011 0.000002298 0.000000013 0.000000002 0.000000002 0.000000001 0.000000001 0.000000002 0.000000002 0.000000002 0.000000001 0.000000001 0.000000001 0.000000001 0.000000002 0.000000002 0.000000011 0.000000011 0.000000019 0.000000013 0.000000002 0.000000002 0.000000001 0.000000001 0.000082085 0.000085294 0.002625649 0.823852928 0.000000001 0.000000001 1.392021720 0.000000002 0.000004559 0.000000062 0.000001551 0.000000019 117.458815728 0.000000013 0.000000002 0.000000002 0.549990926 0.000000530 3.978661130 0.000000031 1.857217122 0.034162029 2.280464482 0.336498637 0.000000001 0.233684595 0.000000014 0.000000230 11.816426717 0.000000019 0.000000012 5.766656277 0.007536160 0.065393500 0.065756300 0.073839400 0.067953400 0.040555100 0.060861200 0.046359200 0.089349200 0.109283000 0.110437000 0.095396500 0.057507000 0.047844800 0.008822270 0.009017870 0.005280250 0.008022480 0.008085240 0.022699500