Protein TMLHE

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSDORP00000008638	pdb,4c8r,F,#1	1	384	0	89.583
ENSTTRP00000002754	pdb,4bhi,A,#1	1	385	0	90.909
ENSCGRP00001007278	pdb,4c5w,A,#1	1	384	0	89.062
ENSSHAP00000013393	pdb,4c8r,E,#1	1	385	0	78.961
ENSTGUP00000005935	pdb,3o2g,A,#1	1	386	0	63.731
ENSSSCP00000048141	pdb,4c8r,B,#1	1	384	0	88.281
ENSPSIP00000004418	pdb,4c8r,B,#1	54	438	0	70.39
ENSEEUP00000012933	pdb,4c8r,B,#1	1	384	0	80.99
ENSCGRP00001007278	pdb,4bg1,A,#1	1	385	0	89.091
ENSFCAP00000028808	pdb,4c8r,A,#1	1	384	0	90.104
ENSPEMP00000021877	pdb,4c8r,C,#1	1	275	0	78.457

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.056	0.229	0.715	0.202	0.588	0.21

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.295793758480326	0.23202170963365	0.0407055630936228	0.0325644504748982	0	0.00135685210312076	0.00271370420624152	0.394843962008141

Loading ...

Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.983353212 0.057716740 1.823557651 0.000000019 0.002308187 4.106840380 0.389573322 0.151289327 0.075266822 4.779660459 0.032710738 0.058263009 0.128169912 0.542193177 0.194774806 0.417834946 0.153335619 0.245571731 0.397443122 5.083955053 5.513087705 0.000000019 0.001948890 0.003856011 0.203248522 0.240113284 6.258109145 0.375428888 0.000000019 0.044645264 0.090477987 0.012863534 0.273894195 0.442229411 0.318142121 7.176277499 0.044402358 0.002737162 0.045041743 0.019374887 0.081147141 0.505113805 0.302475616 0.010325831 6.561248638 0.000000019 0.007986087 0.010282350 0.006999378 0.059593881 0.369139577 0.176672316 0.161389451 0.114581048 6.439452612 0.000000019 0.014813973 0.015107025 0.006356297 0.332395102 0.068387971 0.103557346 0.592657237 0.075865333 0.084368873 7.875683150 0.000000019 0.000000001 0.000000001 0.035776921 0.068244734 0.079687895 0.275694348 0.000005071 0.225638741 0.604473811 0.369555747 10.607223693 0.000000019 0.037338620 0.000009065 0.049323488 0.329738969 0.000000006 0.725696078 0.138878572 0.210882224 0.000990768 0.186594749 0.005533599 19.990468047 0.000000019 0.000000001 0.135342449 0.000000001 0.681513391 0.000000196 0.428942135 0.621430758 0.455888817 0.666718996 0.076213934 0.485619452 0.068080106 10.251907984 0.000000019 0.000000001 0.000000123 0.000026197 0.211421920 0.000000005 0.000003303 0.000002869 0.065048504 0.000000019 1.658441916 0.320693811 2.666040548 30.123680650 66.971586892 0.000000019 0.000000001 0.000000001 0.000000001 0.706176562 0.000000001 0.747461262 0.002523201 0.000000001 0.000000001 0.206063149 3.879456577 0.000000005 0.000000014 0.000000038 0.000000196 0.000000019 0.000000001 0.000000001 0.000000001 0.467963265 0.000241832 0.451667993 0.000255243 0.000000310 0.494133298 0.000008146 0.946290679 2.977011172 0.000000014 0.000000029 0.007149524 0.000000086 0.000000019 0.000000001 0.000000084 0.822691282 0.000000221 1.771274449 0.000000740 0.000160811 0.911550018 1.686109929 0.001781427 6.803821985 0.000002109 19.655209743 0.000136713 165.280628013 0.000000086 101.896290447 0.000000019 0.000000001 0.000000001 0.612250273 0.000000001 0.602065476 0.000000001 0.499692577 0.000000046 0.000631568 0.000000667 0.000000112 0.000008302 30.859945873 20.516513491 0.102425825 32.034576306 4.068593923 384.962497140 0.005248460 0.116650000 0.086134100 0.078971300 0.109106000 0.090206800 0.115648000 0.079694800 0.083034500 0.085993800 0.068634300 0.039497800 0.021401700 0.007390000 0.003493810 0.003235600 0.001157440 0.001722310 0.000957127 0.001822260