Protein TOMM70

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSDARP00000132217	pdb,3now,A,#1	131	923	0	37.39
ENSLOCP00000011472	pdb,3now,A,#1	132	916	0	37.262
FBpp0312575	pdb,3now,A,#1	138	923	0	99.746
ENSONIP00000017308	pdb,3now,A,#1	132	917	0	37.468
ENSTRUP00000020298	pdb,3now,A,#1	139	924	0	37.975
ENSAMXP00000011346	pdb,3now,A,#1	137	923	0	36.962
ENSDARP00000023678	pdb,3now,A,#1	139	923	9.99e-180	36.629
ENSGMOP00000011605	pdb,3now,A,#1	133	916	1.21e-179	37.738
ENSTNIP00000018487	pdb,3now,A,#1	137	922	8.07e-179	37.089
ENSGACP00000013204	pdb,3now,A,#1	135	923	2.52e-178	36.869
ENSLOCP00000018593	pdb,3now,A,#1	136	928	2.83e-175	37.641

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.027	0.05	0.923	0.006	0.142	0.852

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.0377952755905512	0.166535433070866	0.123228346456693	0.0822834645669291	0.0362204724409449	0.0224409448818898	0.0192913385826772	0.512204724409449

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

1.482939568 0.000367197 2.613805183 0.000000780 0.000059151 7.798947645 0.083730895 0.112750981 0.056235304 7.491746078 0.085523176 0.003308954 0.080531433 0.027211948 0.117402483 0.006430733 0.269180804 0.035156708 0.331510182 6.505673822 8.666244760 0.000000027 0.002556724 0.027791907 0.111021497 0.036386300 10.027913877 0.304447546 0.000000027 0.000160899 0.020400831 0.041723836 0.165209169 1.005431706 0.177426377 8.856931877 0.000000027 0.000682699 0.006932641 0.002917562 0.044382411 0.053152730 0.367860206 0.066072268 6.203093047 0.000000027 0.001499432 0.006720755 0.000002630 0.122797761 0.239287659 0.112738337 0.046853736 0.054010754 4.723819082 0.038627464 0.003642561 0.005137827 0.000000018 0.008601022 0.074577957 0.118791965 0.131145924 0.064462289 0.007975485 4.569356606 0.000000027 0.010584515 0.012864181 0.003266001 0.052107411 0.079006887 0.177354408 0.027090322 0.128422105 0.038827754 0.036683743 6.039718416 0.000000027 0.000003149 0.015363541 0.000001345 0.101572684 0.026198487 0.208344591 0.000512992 0.014502426 0.071581573 0.008952250 0.000010617 10.836159723 0.000000027 0.000001868 0.002345566 0.000059232 0.007439609 0.027434400 0.061812242 0.074859164 0.052028836 0.108117351 0.128916207 0.142062196 0.003210436 23.957995463 0.000000027 0.061766924 0.386410338 0.326731447 0.197090529 0.000078134 0.384771665 0.202928629 0.062372006 0.195681659 0.649626113 0.235183592 0.530258396 1.969013842 84.257519894 0.000000027 0.000000001 0.393733704 0.000000627 0.000616845 0.226262997 0.093283553 0.000076351 0.380408685 0.001802518 0.581831376 0.000445556 0.224874998 0.609275912 2.777830607 76.573197899 0.000000027 0.199209348 0.220698112 0.044512995 0.331040978 0.000223438 0.074551523 0.000000238 0.000000002 0.000000019 0.567326657 0.109407483 1.219311089 0.471791335 11.533294052 12.763085287 10.155565015 0.000000027 0.034201401 0.252118858 0.000004938 0.000382216 0.652395340 0.050183284 0.002963286 0.126229391 0.391294138 0.440257781 0.013211571 0.745732006 0.433616022 24.936673045 4.864640602 14.996452550 42.023241149 0.000000027 0.000594002 0.085388974 0.000055068 0.366436416 0.026206380 0.214822951 0.286398735 0.018002535 0.111485696 0.192198343 0.834780564 2.711979230 0.981196019 15.918576296 7.024259642 7.131987543 82.641954178 68.205852464 0.003687480 0.123316000 0.059371600 0.053277700 0.082069900 0.073476000 0.084759100 0.069336200 0.082591700 0.102632000 0.104042000 0.085899700 0.045759200 0.018559900 0.003428240 0.001957160 0.001338990 0.001332120 0.001249730 0.001915630