Protein TRMT10C

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
YOL093W	pdb,4jwj,A,#1	84	274	2.44e-143	100
ENSMGAP00000011708	pdb,4jwg,A,#1	103	281	3.35e-54	46.703
ENSPSIP00000007975	pdb,4jwg,A,#1	96	278	8.57e-54	46.524
ENSACAP00000011929	pdb,4jwg,A,#1	103	280	2.48e-53	45.304
ENSMGAP00000011708	pdb,4jwf,B,#1	103	281	6.07e-53	46.154
ENSMGAP00000011708	pdb,4jwf,A,#1	103	281	6.07e-53	46.154
ENSAPLP00000002223	pdb,4jwg,A,#1	108	285	9.04e-53	45.304
ENSPSIP00000007975	pdb,4jwf,A,#1	96	278	1.72e-52	45.989
ENSPSIP00000007975	pdb,4jwf,B,#1	96	278	1.72e-52	45.989
ENSMODP00000025903	pdb,4jwg,A,#1	98	275	1.92e-52	45.856
ENSACAP00000011929	pdb,4jwf,A,#1	103	280	5.61e-52	44.751

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.039	0.092	0.869	0.042	0.505	0.453

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.299173553719008	0.241322314049587	0.0925619834710744	0.059504132231405	0.0330578512396694	0.0247933884297521	0.00661157024793388	0.24297520661157

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

7.193776381 0.000000182 2.721778336 0.000000182 0.000001534 6.195691880 0.000000182 0.000280341 0.000246061 10.657009429 0.005961592 0.032209209 0.105685351 0.492563661 0.000347427 0.843662290 0.237992782 0.221862759 0.112754774 8.428201755 8.608315216 0.561764148 0.006813711 0.079231759 0.177746780 0.134004206 10.251966073 0.003846664 0.000022605 0.009192838 0.005374347 0.037143949 0.157381909 0.298048018 0.301143894 7.105168843 0.000000182 0.020069471 0.001284075 0.013617830 0.003420607 0.083090258 0.347621328 0.002996236 6.341866076 0.000000182 0.003668865 0.002327050 0.023874117 0.034642480 0.170472998 0.054985314 0.056328440 0.004866748 4.365632906 0.000000182 0.000000001 0.000000129 0.000925465 0.001531018 0.119125433 0.054976545 0.090852641 0.188553016 0.004769466 3.633866373 0.000000182 0.000000001 0.000015936 0.063446129 0.025404601 0.078753657 0.064070198 0.026889888 0.236361124 0.159339603 0.019429787 4.141710015 0.000001339 0.000000001 0.000028347 0.071056888 0.000910231 0.265299138 0.004495938 0.004602789 0.116338601 0.000142668 0.133484256 0.004315269 8.615455942 0.394195931 0.028437792 0.307288752 0.096414288 0.291169751 0.322665875 0.718886052 0.311403630 0.531776944 0.000000043 0.001429734 0.047041395 0.116476801 17.668020839 4.029988117 1.909563518 0.002978902 0.001832542 0.061604253 0.722302185 2.248365264 0.062101528 1.372489614 0.000012519 0.000459844 0.005854927 0.091227327 4.582163989 144.326940917 0.000036230 0.000000001 1.719705978 0.074194358 0.001786661 0.219148415 0.089255086 0.922396807 1.226237941 0.011771930 0.149674479 1.594358561 0.568263304 0.194339179 0.162435977 341.537431742 0.000000182 0.000000001 0.000000002 0.000000002 0.000000002 1.152647489 0.000000390 0.000000002 0.000258324 0.003204654 0.948881377 0.097079640 0.878712093 0.106997520 0.000000220 2.537037168 248.746531665 0.000000182 0.000000001 0.000000002 0.018947167 0.000180038 0.066071141 0.007672823 0.923637407 0.313102782 1.053318628 0.007038174 0.001742018 2.293028842 0.138400560 11.121849472 22.877998943 0.080064509 170.262997023 0.006434104 0.067775025 0.007966739 0.002235972 0.000014448 0.000909099 0.001508067 0.000002741 0.000001172 0.045338190 0.571733961 0.049106381 1.469753970 3.961980966 6.289980716 0.609381716 0.017463793 0.137556480 111.966590737 0.000548684 0.077384700 0.051465600 0.042655400 0.046218400 0.059611200 0.059306200 0.061663700 0.071657300 0.091030100 0.131635000 0.136490000 0.113238000 0.040442900 0.007114680 0.001419250 0.000944978 0.001504960 0.002436450 0.003232980