Protein UQCRFS1

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSMGAP00000016533	pdb,3l73,E,#1	12	207	1.03e-144	96.939
ENSMGAP00000016533	pdb,3h1h,E,#1	12	207	1.03e-144	96.939
ENSMGAP00000016533	pdb,3l72,R,#1	12	207	1.03e-144	96.939
ENSMGAP00000016533	pdb,3h1k,R,#1	12	207	1.03e-144	96.939
ENSMGAP00000016533	pdb,3tgu,R,#1	12	207	1.03e-144	96.939
ENSMGAP00000016533	pdb,3h1j,R,#1	12	207	1.03e-144	96.939
ENSMGAP00000016533	pdb,3l70,R,#1	12	207	1.03e-144	96.939
ENSMGAP00000016533	pdb,3l75,E,#1	12	207	1.03e-144	96.939
ENSMGAP00000016533	pdb,3h1l,R,#1	12	207	1.03e-144	96.939
ENSMGAP00000016533	pdb,3l74,E,#1	12	207	1.03e-144	96.939
ENSMGAP00000016533	pdb,3h1l,E,#1	12	207	1.03e-144	96.939

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.165	0.392	0.443	0.235	0.394	0.371

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.464953271028037	0.158878504672897	0.00934579439252336	0.00233644859813084	0.00467289719626168	0.00233644859813084	0	0.357476635514019

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

1.504537036 0.000012503 1.629950721 0.000001333 0.243643001 4.236117932 0.285385772 0.384579303 1.588876356 3.939042133 0.000000059 0.565324877 0.556595746 0.339283308 1.373172356 0.000000221 0.129661435 0.872150259 2.520265586 2.388448930 2.461869263 0.000000131 0.012811918 0.528757688 0.713505834 0.751269586 3.097774086 1.638686876 0.000000142 0.282988684 0.247082153 0.703539521 1.516960701 1.520624139 0.877633968 2.696265928 0.000000063 0.006709327 0.530061402 0.376084558 0.543603259 0.979801697 0.668663281 1.556470700 4.238040187 0.000001672 0.275021902 0.130713569 0.018797442 0.307071950 0.349961622 0.604469323 0.861838560 1.936534430 4.982242732 0.000000011 0.067106133 0.397775313 0.153233413 0.007311708 0.490786167 0.024664388 0.562588491 0.459556633 1.452417145 3.919136072 0.000000006 0.059005019 0.025928495 0.000117608 0.005958222 0.317896685 0.047247818 0.355690391 0.209305483 1.003573533 1.399111817 6.917134646 0.000000006 0.000000135 0.378620752 0.001948953 0.411330905 0.002211068 0.044317173 0.000001492 0.029052661 0.656261411 0.664015195 0.215883625 9.212254519 0.000000006 0.026165541 0.000000120 0.000000165 0.081252128 0.000001002 0.048449670 0.083069356 0.001281998 0.290784394 0.014070002 0.406665524 2.721996701 0.002851012 0.000000006 0.000000820 0.000007504 0.204559879 0.000016929 0.000001355 0.164285229 0.000088078 0.000017346 0.136013880 1.922613899 0.207960927 0.000038164 1.749207649 5.406625450 0.000000006 0.000007544 0.000027216 0.000023738 0.000018338 0.218433974 0.017732715 0.000119207 0.846389085 0.740156223 0.000121170 0.020831532 4.185688117 0.000042230 1.155981643 8.682422715 0.000000006 0.299040883 0.000000242 0.000000192 0.000003072 0.000004806 0.007571118 0.000056146 0.001951425 0.019520936 2.575482214 0.014338259 0.001087650 1.325782381 1.022245158 0.000044527 0.000023377 0.000000006 0.000096454 2.181554262 0.061250305 0.007761524 0.000500510 0.002959074 0.000307456 0.216707799 0.015988437 0.007411052 5.462289189 0.006412397 4.113474172 4.784998547 0.000148147 0.000128238 52.759870957 0.000001686 0.001236594 0.083520171 0.247127862 0.072696138 0.037877443 5.268324417 0.132095159 0.014899090 0.485980166 0.175853717 4.660791655 0.115525146 0.012484520 0.002411405 0.054514471 32.239680614 0.045265938 0.022024903 0.016089800 0.109580000 0.096723700 0.102415000 0.086662100 0.095107000 0.102991000 0.075713600 0.069978100 0.058877300 0.056069500 0.045514800 0.028551100 0.019057200 0.019959400 0.006188100 0.003972620 0.003502700 0.001647190 0.001399520