Protein UQCRQ

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSGALP00000041473	pdb,3l74,G,#1	37	117	4.87e-57	100
ENSGALP00000041473	pdb,3h1l,G,#1	37	117	4.87e-57	100
ENSGALP00000041473	pdb,3l75,G,#1	37	117	4.87e-57	100
ENSGALP00000041473	pdb,3h1k,G,#1	38	117	3.8e-56	100
ENSGALP00000041473	pdb,3tgu,G,#1	38	117	3.8e-56	100
ENSGALP00000041473	pdb,3l72,G,#1	38	117	3.8e-56	100
ENSGALP00000041473	pdb,3h1k,T,#1	38	116	2.38e-55	100
ENSGALP00000041473	pdb,3tgu,T,#1	38	116	2.38e-55	100
ENSGALP00000041473	pdb,3l72,T,#1	38	116	2.38e-55	100
ENSGALP00000041473	pdb,3cwb,T,#1	37	115	2.84e-55	100
ENSGALP00000041473	pdb,3h1l,T,#1	37	115	2.84e-55	100

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.122	0.072	0.806	0.207	0.299	0.493

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.554744525547445	0.0291970802919708	0	0	0	0	0.0072992700729927	0.408759124087591

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

5.203576720 0.032978280 3.278460091 0.000001936 0.000018641 5.857748290 0.000000014 0.000000169 0.000147808 3.779218182 0.001911531 0.053834089 0.076167521 0.000992210 0.167361127 0.000397750 0.002193653 0.890503727 0.282330998 5.313754157 8.927045854 0.000425534 0.001693349 0.000082401 0.000900081 0.001040584 8.466594363 0.100878193 0.000002348 0.240097079 0.000533070 0.014758392 0.000000230 0.376171739 0.000021770 7.248595883 0.000000014 0.000003234 0.000142219 0.366709670 0.283015197 0.000000757 0.295532342 0.000009278 6.269188269 0.000000017 0.000062472 0.178346452 0.348317720 0.000000055 0.164476404 0.000002394 0.309791789 1.320618499 5.199415396 0.000000014 0.000020869 0.000146396 0.000000279 0.000000001 0.000006696 0.011046130 0.212580246 0.178153301 0.714272422 5.637702727 0.000000254 0.000061249 0.000003045 0.000000715 0.000000001 0.408508531 0.270093366 0.000272920 0.087496844 0.578515070 0.343000668 4.879528690 0.000098885 0.061223880 0.492462512 0.015892286 0.000000001 0.000000001 0.000035254 0.000000002 0.000000066 0.000000521 0.014305789 1.215670950 5.266871479 0.000000429 0.002130103 0.000000967 0.000000108 0.000000001 0.000000001 0.000000002 0.000000009 2.406305316 1.285053364 0.035776793 0.000003767 0.304659163 12.183342377 0.000156736 0.005791570 0.000195053 0.000000670 0.000000001 0.000000179 0.715418540 0.000001249 0.009427681 0.971504111 0.000073010 0.057122095 0.000003641 3.987284656 27.791122235 0.000024739 0.000351526 0.000013300 0.000000087 0.000000001 0.000000014 0.000003271 0.000000754 0.000029741 0.000008828 2.124032946 2.681241494 0.000003840 0.000002794 5.224667820 97.870271934 0.000000014 0.000000002 0.000000003 0.010823292 0.521742943 0.000000001 0.000000002 2.415142470 0.000000002 0.000000001 0.001252590 0.000000124 1.067991955 0.000000026 2.411318046 0.000000404 34.438396724 0.000000014 0.000000001 0.000000078 1.341863350 0.000000001 0.000000001 0.000000002 0.005431568 0.000000010 0.000000001 0.000020956 0.000000067 0.203525892 0.000000266 0.000182613 0.000000017 0.000010965 154.261352550 0.000000014 0.000000001 0.000000002 0.000000003 0.000000001 0.000000001 0.000000002 0.000000321 0.000000002 0.000000108 0.856413209 1.863599721 1.344759969 1.467772029 0.000000314 0.000000007 0.000000896 23.365115704 13.752008398 0.007228970 0.099465600 0.072769600 0.076506300 0.072982300 0.079571900 0.062195900 0.049550700 0.066153700 0.069859200 0.083190800 0.069219800 0.069559700 0.034462300 0.027169000 0.014297600 0.004512260 0.015375400 0.014003700 0.011925300