Protein WARS2

Results of BLAST Screening for sufficient 3D structure homologs in Scratch-1D dataset

Protein ID	Structure	Start	End	E value	Bit score
ENSPSIP00000019815	pdb,3n9i,A,#1	8	330	1.8e-95	44.479
ENSPSIP00000019815	pdb,3n9i,B,#1	8	330	1.8e-95	44.479
ENSGGOP00000019893	pdb,3n9i,A,#1	37	360	6.65e-92	42.813
ENSGGOP00000019893	pdb,3n9i,B,#1	37	360	6.65e-92	42.813
ENSODEP00000001542	pdb,3n9i,A,#1	37	360	3.98e-91	43.425
ENSODEP00000001542	pdb,3n9i,B,#1	37	360	3.98e-91	43.425
ENSLOCP00000013509	pdb,3n9i,B,#1	41	362	4.7e-91	45.092
ENSLOCP00000013509	pdb,3n9i,A,#1	41	362	4.7e-91	45.092
ENSDNOP00000030428	pdb,3n9i,A,#1	36	359	8.69e-91	43.425
ENSDNOP00000030428	pdb,3n9i,B,#1	36	359	8.69e-91	43.425
ENSTSYP00000012412	pdb,3n9i,A,#1	37	360	4.72e-90	41.896

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.106	0.128	0.766	0.023	0.263	0.713

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.252551020408163	0.127551020408163	0.00510204081632653	0.0102040816326531	0.0102040816326531	0.0038265306122449	0	0.590561224489796

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Predicted (by scratch-1d 1.1) residue solvent accessibilities coding: -5(unknown)=A, 0=R, 5=N, 10=D, 15=C, 20=E, 25=Q, 30=G, 35=H, 40=I, 45=L, 50=K, 55=M, 60=F, 65=P, 70=S, 75=T, 80=W, 85=Y, 90&95=V

Empirical model for relative rates of residue solvent accessibilities changes (in PAML format)

0.000812884 0.004479606 2.368574669 0.145938935 0.000067672 6.616571948 0.683279229 0.032475346 0.008629043 6.299797113 0.653901465 0.001387438 0.092949928 0.048401874 0.001087169 89.807165855 0.087988470 0.020723348 0.681378580 7.109253924 7.244142199 73.341948207 0.000006429 0.044845891 0.065311709 0.001253346 6.329562424 0.051889098 0.121020091 0.000000015 0.023328377 0.004298000 0.016414975 0.631264168 0.001138069 7.380357574 105.275846731 0.009816786 0.012636820 0.000113198 0.044005428 0.198380980 0.262629431 0.089089715 6.921271602 9.076295878 0.001722339 0.006754091 0.016684294 0.020259304 0.276755729 0.013207888 0.086953108 0.054937596 5.668033785 31.416765010 0.000000093 0.002190242 0.159910234 0.000473697 0.000007020 0.000026280 0.384106660 0.020747910 0.050311316 8.281437934 4.021165105 0.000000001 0.000004269 0.000043920 0.159096812 0.033266080 0.000929427 0.125442525 0.001958552 0.016298544 0.001276331 6.970600634 0.003052016 0.000000001 0.030700263 0.000050470 0.000000001 0.000000001 0.000000004 0.000013819 0.141068309 0.234145489 0.001681400 0.000004897 13.443748172 1.431182066 0.000000001 0.000000020 0.719386408 0.000000089 0.537882060 0.000002838 0.000029235 0.040819470 0.028150146 2.647893724 2.294641631 0.055962775 30.433004513 14.248173458 0.694534631 1.734479082 0.000770676 0.001633840 0.008379863 0.374953809 0.044244378 5.163297276 0.002513587 0.006758969 0.001561139 4.744021357 5.263620752 119.675918617 77.424892083 0.000000001 0.000157638 3.113470268 0.192896867 0.002315607 0.000633160 0.386365955 0.130805539 2.939728199 0.000008595 0.000267225 3.370504739 0.074545709 0.146217647 2.913864532 0.000012054 0.000000001 0.000000001 0.000000001 0.000000001 0.231259870 0.000000001 0.000000001 0.000000001 0.000000001 0.000000001 1.044201424 0.000000003 10.835017373 0.000000053 0.000000078 0.000000081 0.019465315 0.000288946 0.781942230 1.804655261 0.000362603 0.000000589 0.000012734 0.000130204 0.000087962 0.000026999 0.000749224 5.315010418 11.248156468 0.246583330 0.002563727 1.786752223 0.139565000 0.000000093 0.000069812 0.000000001 0.000000001 0.000000001 0.000000001 0.000000158 0.000000001 0.043817729 0.008022554 0.000001620 0.000000001 0.000000002 0.000000003 3.520324294 81.530308293 0.000201406 180.926353522 71.725392871 0.000000107 0.000008296 0.138417000 0.102233000 0.079896700 0.082011700 0.093081000 0.089574500 0.083300300 0.087646900 0.080095500 0.070420500 0.041514500 0.032139400 0.012519500 0.001900140 0.001284140 0.001238620 0.001079870 0.000932981 0.000705311