Protein ACADM

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	234.768295687001	0
Primates and Rodents clades	79.5400067227993	2.22e-16

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.395	0.312	0.293	0.465	0.288	0.246

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.63166144200627	0.0266457680250784	0.0266457680250784	0.0188087774294671	0.0125391849529781	0.00156739811912226	0.00940438871473354	0.272727272727273

Loading ...

Empirical model for relative rates of amino acid substitutions (in PAML format)

0.094162969 0.205577487 0.075710908 0.432952184 0.544503135 11.687744525 0.572923870 1.299043498 0.000718416 0.000000003 0.412977231 2.454528277 1.052470874 0.123090666 0.000000005 0.756090677 0.079671906 0.029906557 8.596485996 0.487196121 3.175351703 1.861434029 1.104656883 1.005049302 1.491644472 0.084983292 0.567396246 0.750714670 0.786953799 8.022582232 5.484862922 0.393656778 2.845229184 9.459876780 0.008124043 0.850368436 0.108672965 0.000011675 0.023753627 0.607649566 0.749025191 0.000000002 0.000000002 0.048399285 0.450677122 0.036092583 0.650673330 0.237686055 0.000000003 0.639690018 0.702232667 0.000089435 0.000002363 2.105668973 4.182590234 0.044260888 7.090899187 2.665988133 0.000000003 0.041983131 3.432223772 0.713407175 0.081006668 0.000025413 0.134650066 0.232619836 0.000000120 0.000000002 0.000000004 0.826474036 0.068671080 0.385833050 0.000000002 0.000000001 0.000000007 3.039875773 7.153063144 0.423374745 0.355789388 0.478930229 0.000392741 0.805814123 1.084286127 0.000000002 0.022586240 0.224681123 1.220187329 0.577949757 4.465881278 0.000000002 0.763531326 2.334413257 0.454735953 0.759838740 0.388025781 0.000000005 0.966414444 0.000000002 0.971030474 2.335733314 0.664187451 2.405337321 0.723977449 0.355397687 0.000056520 4.627798499 0.166165804 10.625045115 0.000054021 4.901051375 0.029951130 0.048248941 2.457173319 2.040777856 0.422589524 0.608951080 0.714044247 0.088639980 0.783571299 2.029413157 3.246095487 0.541415228 0.220934572 0.249164149 0.851300642 0.098595166 0.052961202 0.252351324 0.000000337 1.643832176 0.195355981 0.370386432 1.087342065 0.653765055 1.951532348 7.802051768 0.378010400 1.879282257 0.000000004 0.000000003 3.401582200 0.000000101 0.000000002 0.672580212 0.000000007 0.000000001 0.000000001 0.000000002 1.641025032 1.356186888 0.000000003 0.677171870 0.000000038 0.117322334 0.262582709 0.970397159 0.689949208 5.549586838 0.000000002 0.257435239 0.051570343 3.859568396 0.114568272 0.122300730 0.027599650 0.000000003 14.436898423 0.000000003 0.000399767 0.460677806 0.000000017 2.427005345 0.585667279 0.616202521 0.053831494 1.400349317 0.014528350 0.706768371 0.460219360 0.468510725 12.181532356 3.380415128 0.301917528 2.364668931 2.441481646 0.051884738 0.000000171 2.057401842 0.858375086 0.000246661 0.110193000 0.058745300 0.027706800 0.033528700 0.020439900 0.045528500 0.063595800 0.079348900 0.015277900 0.067682700 0.086657700 0.065255900 0.033684800 0.043157400 0.033797800 0.069003900 0.051740500 0.005999580 0.031794400 0.056860000