Protein ALDH5A1

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	2341.60786919639	0
Primates and Rodents clades	350.992411112598	0

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.273	0.44	0.288	0.369	0.273	0.358

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.274647887323944	0.246478873239437	0.0457746478873239	0.00985915492957747	0.00704225352112676	0.0105633802816901	0.00633802816901408	0.399295774647887

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Empirical model for relative rates of amino acid substitutions (in PAML format)

0.328063273 0.065022520 0.208231006 0.596483612 0.061492361 8.738946049 0.761811736 1.741486791 0.527806559 0.000307510 0.332373743 5.682539422 0.597981575 0.205295819 0.029989836 0.811218436 0.103184108 0.618362610 6.205244269 0.081448833 3.552659158 1.477253817 1.270892484 0.570520389 1.130149394 0.802457842 0.196605310 0.892727755 0.271243940 4.178857260 4.793820229 1.959042953 2.314067914 6.666907073 0.157217554 0.177367491 0.033320852 0.263968872 0.615527337 0.109041725 0.187366597 0.065767772 0.018478762 0.066754796 0.450359826 0.224106432 0.619759984 0.189673743 0.068675530 0.798156618 0.819523860 0.123544142 0.083968072 0.693647030 2.804572368 0.377166088 5.619397911 3.570560549 0.305171119 0.045343174 3.271022982 2.221730556 0.236545936 0.054596226 0.144125624 0.040612291 0.567478837 0.191965595 0.006275270 0.009416021 0.791711712 0.080819395 0.265529757 0.151578748 0.844243014 6.144521459 5.023253341 0.669296437 0.377053035 0.107281098 0.000677132 0.082335325 1.168205128 0.000304442 0.159415304 0.117243564 0.220909510 0.936188935 2.887970084 0.000030600 0.824315032 1.513457782 0.971782920 0.030667494 0.342426444 0.546625087 1.291543928 0.261369927 0.175840485 0.769776465 0.003157521 1.207380603 0.153963508 0.055151275 0.080779040 2.930594747 1.265551505 5.460551151 0.686001699 4.470940171 0.353532735 0.477954557 1.647110045 0.827497706 0.345944911 0.412744978 0.549085864 0.286220776 1.073444766 2.956425986 4.620134216 0.314162605 2.190340795 0.072013953 0.649614230 0.714920001 0.350821194 0.158428824 0.441394216 1.714188163 0.463306009 1.371025119 3.557077118 0.046713135 1.125413326 5.027822342 0.032214293 1.831447880 0.000012000 0.000024128 1.039182259 0.932937865 0.000014235 0.550392479 0.250738983 0.080956333 0.400251455 0.000987228 1.338998202 1.234992316 0.164887710 0.443564549 0.000025550 0.066820418 0.507877944 0.592600178 0.103874534 3.925359205 0.015422759 0.025549645 0.060242176 11.144643132 0.186708989 0.383782815 0.001471103 0.016498255 8.688972919 0.059356103 0.651684270 0.390498933 1.412114510 2.382018305 0.056313086 0.040830743 0.200691495 0.371192885 0.185097353 0.371283913 0.359511610 0.058955130 11.936122315 2.473819793 0.012880992 4.519612821 0.745485600 0.252797477 0.262695288 1.026760356 0.045949195 0.140442596 0.110568000 0.061037500 0.024900600 0.040737800 0.021645000 0.044369300 0.060339000 0.079240000 0.021468700 0.036025100 0.095921700 0.048800200 0.018906000 0.030386100 0.063932600 0.079037200 0.049539700 0.016278000 0.022431300 0.074436300