Protein ATP5O

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	121.713420370401	0
Primates and Rodents clades	47.8544050300006	1.012e-09

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.239	0.384	0.377	0.39	0.337	0.273

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.486215538847118	0.0426065162907268	0	0	0	0	0	0.471177944862155

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Empirical model for relative rates of amino acid substitutions (in PAML format)

0.000009875 0.161287373 0.043652697 0.475724593 0.000000385 3.134390083 1.029953943 10.514668442 0.000003015 3.423942827 0.605647311 4.022464747 1.143061444 1.341323890 0.000005033 0.799316390 0.010268992 0.436780444 8.646754371 0.447499321 1.703739219 1.713686699 2.738530069 2.202162771 1.540573974 1.039911360 0.100085264 0.558836756 0.288042957 17.101594544 5.802341001 0.000107650 0.001575746 1.550987620 0.881037326 0.000352650 0.000073031 0.000000004 0.192926304 0.000000537 0.443474312 0.104967830 0.000000115 0.000000003 1.289518947 0.182649909 0.720076740 0.233458646 0.000001642 0.000000635 0.861525694 0.000308185 0.015895094 0.520398092 1.971645934 0.199658753 4.049307775 4.137626502 0.000353544 0.000000157 3.381641168 1.665520537 0.009059337 0.000017564 0.000017281 0.049817648 0.280542204 0.057802320 0.005502846 0.000000592 2.524464583 0.174290500 0.187250787 0.463729488 0.000223592 4.450293425 3.891530654 1.023720294 0.213968842 0.000139732 0.016174542 0.139772782 1.402871851 0.000000188 0.086535939 0.000000005 3.726156366 1.521052885 4.910777801 0.232252391 0.484382060 1.504845491 0.765974508 0.035518694 0.066779047 0.565447956 2.509251271 0.408773048 0.119511930 1.571929556 0.000000027 1.292765037 0.000018378 0.001760442 0.058299127 2.900090330 1.292639117 5.393506351 1.454221482 4.623908601 0.124619032 0.275888173 2.637851692 0.020300354 0.027311581 0.309823960 0.237722965 0.000000216 0.591431065 2.425868863 5.007271024 0.232441773 0.720582075 0.381822552 0.740213236 0.216293774 0.000340537 0.047724853 1.115544748 2.658800678 0.180147685 0.297086124 2.589894338 0.247830017 0.517291786 4.875108053 0.000036983 29.493851563 0.008808262 0.000005743 0.004527514 16.340630954 6.729182282 0.000044843 1.928504423 0.000000034 1.767140581 0.000021008 3.312130169 0.000159513 0.003167180 1.561590317 0.000151833 0.025713553 0.000002077 0.319228809 0.572406942 10.785025578 0.179358015 0.013129179 0.000000002 27.818767669 0.154757305 0.000000315 0.000000005 0.005326512 7.426178010 0.253917499 0.462197165 0.020429487 17.638736268 2.786519611 0.000000007 0.080103896 0.000003298 0.019602561 0.005772677 0.083453006 0.222218810 0.000056730 10.613643565 1.426182532 0.000067349 1.627189043 0.820816754 0.011534104 0.097504133 0.190204950 0.000000179 0.000000028 0.089671000 0.049882600 0.037479700 0.031203500 0.008059610 0.039524300 0.053368000 0.048849600 0.009412890 0.058072800 0.099807000 0.092111000 0.036739800 0.028650000 0.045628600 0.091274900 0.066572400 0.002993990 0.020906800 0.089791300