Protein COA5

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	6.60216838860015	0.1585
Primates and Rodents clades	0.105559559399921	0.9987

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.357	0.383	0.26	0.543	0.267	0.19

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.793478260869565	0.0217391304347826	0	0	0	0	0	0.184782608695652

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Empirical model for relative rates of amino acid substitutions (in PAML format)

0.000000002 5.502099036 0.000000001 2.848473736 0.000000001 11.138928297 0.000000002 0.000000001 0.000000009 0.000000002 0.000000002 2.022363919 0.000000009 0.000000002 0.000000001 2.003860296 0.000000001 0.000000009 5.044011009 0.000000001 3.291696628 0.000000002 0.000000001 13.994084212 1.742287462 0.000000001 0.000000002 0.000000001 4.311854004 2.891706967 19.734345879 0.000000002 2.548005227 0.000000002 0.000000001 0.000000001 34.809253129 0.000000001 0.000000009 0.000000002 0.000000001 0.000000002 0.000000001 0.000000001 0.000000014 0.990187128 0.497798129 0.000000009 0.000000002 0.000000001 0.000000002 0.000000001 0.000000001 0.000000014 50.633507220 0.000000002 5.067168353 5.586237911 0.343778874 0.000000001 3.929255306 0.121942756 0.426783339 3.232827332 0.000000043 0.248942200 0.000000002 0.000000001 0.000000009 0.000000002 0.000000001 0.000000002 0.460401408 0.000000001 0.000000014 161.080546535 2.445435173 0.000000001 0.000000002 0.000000001 0.000000009 0.000000002 0.000000001 0.000000002 0.000000001 0.000000001 0.000000014 0.000000043 0.579601663 0.000000001 0.000000004 7.057933391 0.000000001 0.000000009 0.000000002 0.000000001 1.644523265 0.000000001 0.000000001 0.000000014 0.000000043 0.000000001 0.000000001 1.908919934 0.000000003 23.661490653 1.268166618 15.088226840 1.273531035 0.000000001 0.000000002 0.000000001 1.814944189 0.000000014 0.000000043 0.411845515 0.000000001 1.852270932 0.000000003 0.000000003 23.087078625 0.926048184 32.514488117 0.000000002 0.000000001 3.560726030 0.000000001 0.000000001 18.349635357 0.000000043 0.000000001 0.763303098 9.584545717 2.183750766 0.000000003 16.004546877 0.000000002 0.000000001 0.000000009 0.000000002 0.000000001 0.000000002 0.000000001 0.000000001 0.000000014 0.000000043 0.000000001 0.000000001 0.000000004 0.000000003 0.000000003 0.000000002 0.000000004 0.000000002 0.317990710 36.499485382 0.000000002 1.114069747 0.000000002 0.980789543 0.000000001 36.694132938 0.000000043 0.000000001 0.000000001 0.000000004 2.102573002 0.000000003 0.000000002 0.000000004 0.000067147 2.488443239 0.729742207 6.835693158 0.000000002 0.783761242 0.000000002 0.000000001 0.741685681 0.000000014 184.004266565 9.436802206 0.000000001 3.545709606 3.277309647 3.247300297 0.000000002 7.323009981 0.000067147 0.000000002 0.051809500 0.095305300 0.010784700 0.061257400 0.078054000 0.049507600 0.092215400 0.090807200 0.007201560 0.002315680 0.097324600 0.100766000 0.025947500 0.039471400 0.038791300 0.054323000 0.025418100 0.000001489 0.049662500 0.029035600