Protein COX16

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	35.2704884525992	4.087e-07
Primates and Rodents clades	19.9453721241998	0.000512

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.149	0.35	0.501	0.206	0.421	0.373

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.45933014354067	0.0574162679425837	0.00956937799043062	0.00956937799043062	0.00478468899521531	0	0.00956937799043062	0.449760765550239

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Empirical model for relative rates of amino acid substitutions (in PAML format)

0.003464460 0.542308278 0.006983244 0.136349871 0.000337677 8.004417570 2.743931832 13.718654964 0.000013205 0.000143021 0.002729936 3.098414809 2.816018130 0.083069215 0.000099237 1.451731522 0.000000042 0.025755739 2.846999290 0.000055732 4.536884412 1.459951437 0.637598592 0.642124611 0.207888552 19.108107031 0.000001961 1.180033446 1.466632021 8.329638223 8.211197443 3.420779455 0.018666106 14.937842091 0.000026962 0.000001418 0.004899370 0.000129895 0.553728826 0.000426306 7.447102743 0.002090297 0.000368965 0.004745479 0.003957641 0.006826651 0.285418632 0.000000003 0.000008947 0.063735660 0.932964852 0.025357181 0.288228401 0.093752500 1.339498555 0.220385818 4.386092649 3.242423293 0.000009231 0.000001707 1.635764237 0.770059538 0.000000067 0.000176020 0.342227634 0.000328779 0.855544903 0.369428362 0.000000003 0.000000002 0.000034248 0.000091560 1.841931449 0.000000002 8.067910935 4.434551685 5.944097799 1.058022923 1.413956114 0.183453473 0.000000003 0.000000002 0.067061949 0.000007822 0.000000001 0.183610702 0.000048121 0.000001876 3.673547911 0.000000001 0.000047428 2.328904101 0.285678500 0.000001429 0.236704569 20.981203978 0.470578745 0.000013210 0.233984127 13.773623413 0.000004284 0.038167340 0.000343250 0.000000059 0.455011097 3.309111436 0.765490786 3.656191908 0.001264172 0.675710386 1.104884019 1.294120678 1.259378896 0.974342830 1.594707864 1.001682947 0.000001162 0.000002697 0.502930505 1.137736754 8.928938149 1.193739304 2.030001358 0.828481994 0.008021476 0.654062067 0.017638551 0.088538789 1.535787175 3.135337352 0.355151861 1.657370479 2.524009032 0.000000009 1.525165539 6.440753915 0.616015124 0.871046095 0.000000003 0.000000002 0.000000124 0.000000002 0.023025197 0.000000002 0.000000010 0.000000002 0.874014631 0.000000001 1.798653944 5.353215582 0.000000002 0.000000002 0.000000002 0.419780121 0.015339080 0.000000003 0.000000002 0.000004958 1.073731415 0.000000001 0.000000002 4.289766929 0.000000023 0.670960927 0.115129133 0.269610897 3.707188709 0.000000002 0.013827617 1.238841762 0.000000006 5.366419669 0.004166751 0.029265357 0.301699119 3.979607040 0.436335197 0.000000851 0.000000016 0.000028838 10.360620452 3.003591121 0.104761674 3.073464928 1.740914105 0.373435092 0.000087393 0.000039115 0.000000006 0.018551404 0.055803500 0.085428200 0.038301600 0.049996500 0.004765370 0.042770100 0.085390800 0.042752900 0.009799600 0.054450600 0.095903200 0.103304000 0.034322500 0.037621500 0.052359300 0.061370300 0.049748000 0.016169000 0.023321200 0.056421900