Protein COX17

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	39.2704581050002	6.125e-08
Primates and Rodents clades	-1.65430001288769e-05	1

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.217	0.405	0.378	0.447	0.261	0.292

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.261194029850746	0.0746268656716418	0.0149253731343284	0.0223880597014925	0	0	0.00746268656716418	0.619402985074627

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Empirical model for relative rates of amino acid substitutions (in PAML format)

0.139963319 0.000000284 0.000001338 2.052615833 0.000000003 12.294773325 0.019845860 1.250027925 0.000000005 0.651368446 0.174026379 2.290086568 0.010497208 0.000000052 0.582599312 0.424603918 0.147794610 0.000467724 3.547167454 0.000000002 5.997153652 1.491427977 0.000000003 0.609331208 2.482719713 0.000000002 0.354136523 1.201959061 0.000000001 3.443011729 12.692283006 0.000000004 0.001247554 2.422879217 0.117608773 0.000000002 0.000000001 0.000000003 0.000000005 0.000000004 0.238453286 0.000000003 0.000000001 0.288200178 1.388512445 0.000926117 0.000000003 0.000000005 0.000000004 1.041138102 0.000000003 0.176057633 0.000000006 1.524089204 1.356535827 0.029044395 3.914095225 6.688346420 0.000000004 0.000000002 1.598115989 1.546633473 0.421253446 0.000003506 0.000000002 0.000000002 0.243524155 3.371436051 0.000000005 0.000000004 0.000000002 0.000000003 0.000000001 0.000000002 0.000000004 2.202931761 0.621132429 0.455810022 0.000000001 0.000000003 0.000000005 0.000000004 0.000000002 0.000000003 0.000000001 0.000000002 0.000000004 0.000000002 3.399113725 0.000000001 0.000000004 0.173640703 1.279244624 0.000000005 0.000000004 0.000000002 0.058412483 0.006211234 0.325100681 1.057643452 0.000000002 3.399490222 0.575350558 0.000000004 0.000000010 3.671811181 3.229338872 8.687447851 0.685261391 0.701335723 2.991498230 0.000006479 0.814635446 0.411137138 0.602048997 0.000009796 0.016508301 0.026529197 0.000000010 5.357998616 2.248224460 2.553595364 0.000000008 1.565720533 0.000000002 5.925215594 1.430952846 1.422469564 0.000000004 1.943607953 0.000000007 0.000002899 1.012652199 0.000000010 4.368166182 3.004388599 0.000000033 0.000000047 0.000000005 0.004149612 29.218780341 0.000000003 0.000000001 0.000000002 0.000000004 0.000000002 0.000000056 0.000000001 0.000000004 0.000000010 0.000000001 0.000000008 0.000000002 0.000000038 0.000177433 0.000000005 0.000000113 49.605904430 0.000000044 0.000000001 16.934653911 56.423470262 0.000000002 0.000001419 0.000000001 0.000000004 0.000000010 30.491280575 0.000117186 0.000000002 0.014405474 10.109979448 0.000000003 0.000000005 7.297270917 2.326087026 0.000000456 1.075132611 0.892731749 0.000000004 4.228399138 6.958163596 0.000000008 4.831110743 0.000000010 0.000910892 0.000027452 5.088141297 0.000000307 0.000000098 0.153756000 0.028648000 0.018696400 0.025613000 0.062827400 0.029511500 0.122916000 0.060438200 0.026254500 0.053762900 0.053121200 0.085656300 0.024146000 0.010241200 0.073577100 0.087431100 0.047310400 0.002150620 0.001511750 0.032430600