Protein COX5B

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	160.598093483	0
Primates and Rodents clades	22.5895714474	0.0001529

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.23	0.385	0.385	0.339	0.34	0.321

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.540284360189573	0.0710900473933649	0	0	0	0	0	0.388625592417062

Loading ...

Empirical model for relative rates of amino acid substitutions (in PAML format)

0.847324716 0.000000544 0.812031848 0.003894176 0.217194921 6.266630732 0.650757081 2.850686087 0.000100637 0.315817952 0.029347396 4.783280918 0.013086808 0.205300820 0.513022680 0.369048150 0.000000048 0.908685449 3.270652465 0.000000003 3.590142615 1.210978467 1.531381954 0.661439709 1.523418691 0.719251706 0.001455463 0.297211821 0.001374548 2.781228221 2.103521377 0.062915542 0.472129346 3.792613285 0.578065905 0.240318243 0.000000004 0.000000007 0.531187553 0.000000003 0.000000003 0.000000101 0.000003037 0.000870502 1.588727386 0.185606701 0.195424917 0.108735407 0.004228223 0.114484757 1.359146236 0.091139768 0.095768929 0.449338825 2.145982073 0.072054319 3.395075285 1.993778266 0.000000003 0.000000003 2.969505674 1.803048742 0.112314596 0.000000003 0.000005016 0.207912928 0.814005196 0.830459265 0.000000003 0.005036204 0.218892174 0.036500810 0.227778818 0.000000021 0.000001169 5.578907829 3.706746751 0.503316880 2.553322389 0.215129048 2.843467343 0.363576396 0.071448660 0.000000804 0.000000128 0.000002141 0.158486932 1.199663230 7.599135372 0.000000005 1.819078382 1.521277952 1.106147255 0.183943784 0.110437489 0.160109733 1.155273338 0.201366785 0.000001510 0.894491652 0.000076008 0.684504501 0.165603806 0.233270439 0.000020462 4.081804562 1.563973271 7.978478650 0.041981591 3.265448985 0.216753596 0.361495975 1.816414521 0.773512476 0.000000003 0.931486174 0.463549617 0.020940486 1.269328518 2.135139142 5.255391211 0.297762531 1.030816155 0.000000016 0.000074504 0.344109407 0.284121263 0.236116552 1.025193144 2.288433242 0.151226518 0.507700561 0.883940264 0.000515372 0.286346806 5.734908711 0.000001885 1.576550064 0.000000003 0.000000003 0.420176788 0.000000003 0.000000002 0.698478657 0.324128641 0.000000003 1.203307890 0.292114844 0.000000003 0.929121336 0.000000002 0.000413465 0.807357824 0.000000064 0.000001280 0.297659208 0.000000003 5.546344654 0.000000003 0.000000002 0.000000004 7.402174018 0.000307339 0.728253388 0.217177537 0.000000003 18.623669817 0.322396725 0.102017094 1.746417835 1.900163825 5.596181126 0.597056533 0.000000007 0.009637989 0.405083190 0.093499713 0.000125235 1.243949564 0.000000168 13.202372934 1.908858113 0.316080382 2.823626487 4.074304441 0.392426096 0.000054255 0.596274509 0.000000008 0.000000005 0.125482000 0.068300400 0.030425600 0.032896800 0.032570100 0.036370700 0.064092000 0.075564800 0.031103700 0.038602000 0.097197900 0.056664700 0.035509300 0.013456800 0.061387100 0.061623300 0.051526100 0.012391300 0.018409800 0.056425200