Protein COX6C

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	49.0231716321996	5.774e-10
Primates and Rodents clades	12.8278094782004	0.01215

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.173	0.327	0.5	0.285	0.222	0.493

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.581196581196581	0.0598290598290598	0.0170940170940171	0	0.00854700854700855	0.00854700854700855	0	0.324786324786325

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Empirical model for relative rates of amino acid substitutions (in PAML format)

0.000000001 0.009941318 0.600007269 0.372078290 0.000000001 2.238491708 1.198117081 8.049132507 0.000000004 0.000000003 0.273535783 9.540213713 3.458518587 0.000000003 5.470727020 0.352626885 0.000000033 0.000000034 5.860524462 0.000000011 4.731655026 0.717286048 1.484761724 0.479979883 1.965402217 0.000000011 0.112438144 0.425240693 0.000000001 5.545937593 6.049270536 1.708610696 37.148310636 3.651448610 0.000000002 0.000000002 0.089995753 0.000000001 0.000000004 0.000000003 0.000000011 0.000000004 0.000000002 0.000000002 0.000000008 0.199714023 0.000000001 0.000000004 0.000000003 0.000000011 0.371832191 0.000000002 0.000000002 2.431889724 3.256763175 0.000000006 5.020025372 1.581775227 0.000000003 0.000000011 0.973533212 0.994657756 0.026062877 0.000000008 0.000000003 0.000000001 0.016405889 0.000000001 0.000000004 0.000000003 1.944279036 0.000000004 0.262464750 0.000000002 0.000000008 1.931768003 2.518574573 0.542520332 0.000000001 0.000000001 0.490013186 0.000000003 2.745116342 0.000000004 0.000000002 0.305893260 0.000000008 3.032011232 0.837739723 0.000000001 0.199240797 2.820138741 0.004748323 0.000000004 0.000000003 0.000000011 7.086035757 0.000000002 0.000000002 0.000000008 0.000000360 0.132484071 0.959421338 0.000000002 0.230654465 2.873462165 0.424005590 4.452605954 0.953459042 1.764103786 0.011282995 1.424043797 2.181395384 0.000000008 0.353660701 0.621414737 0.435002053 0.554291965 1.021120274 3.711392772 15.697246408 0.000000044 3.332113333 0.000000003 0.000003976 0.000000111 0.000000005 5.658928042 0.000000008 9.283179097 0.421785699 0.073323804 6.481410769 0.000000002 5.240063226 10.222444933 0.000000001 14.660846646 0.000000121 0.000000003 0.000000011 0.000000027 0.000000002 4.844556239 0.000000011 0.000000003 6.980308835 0.000000001 0.000000002 0.000000002 0.000000003 0.000000011 0.000000014 0.000000001 0.319769310 0.000000004 0.923246021 14.020902604 0.000000004 0.000000002 0.000000002 6.902873680 0.000000003 0.000000001 0.000000001 0.000000002 2.462986617 0.000000003 0.493512152 0.000000004 0.000000029 3.133595243 0.000000001 0.000000004 0.000000003 4.775003567 0.936986609 0.627490858 0.274743713 0.000077169 11.375026750 2.926222958 0.241234589 3.558660749 1.386254542 0.202346289 0.000000005 4.408498456 0.000000029 0.008423503 0.141270000 0.085291800 0.023661200 0.033935700 0.009320370 0.024067900 0.051382900 0.065795500 0.011817600 0.038317800 0.075587200 0.089613600 0.044520400 0.065685700 0.037263100 0.064258600 0.026546000 0.003392210 0.038237300 0.070034900