Protein HDHD5

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	419.686859462003	0
Primates and Rodents clades	42.2908374149993	1.452e-08

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.259	0.24	0.501	0.303	0.367	0.329

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.44991789819376	0.170771756978654	0.0623973727422003	0.0229885057471264	0.013136288998358	0.013136288998358	0.00492610837438424	0.262725779967159

Loading ...

Empirical model for relative rates of amino acid substitutions (in PAML format)

0.828217434 0.137719153 0.828357072 0.706424285 0.000055365 4.911018782 0.831277707 3.526547043 0.202320668 0.342345474 0.351742640 5.548443677 0.238081445 0.246763238 0.004442296 1.024920347 0.424952342 0.093934755 4.257902489 0.456871508 3.871668232 1.621143913 1.828870251 0.544792063 1.456535515 1.144166464 0.176615155 1.033710090 0.089159884 2.685361969 4.355767592 0.549506724 2.075200389 5.167682576 0.136415175 0.011477492 0.183669010 0.261913671 0.328825511 0.075334061 0.010029849 0.021591751 0.005306961 0.002277247 0.000000476 0.406657095 0.475482011 0.000022634 0.000010731 0.754816074 0.798597001 0.099842892 0.253055601 0.407305391 1.540618968 0.007740798 4.799985803 2.975975464 0.001573271 0.000011778 2.905696345 2.414726619 0.002646598 0.016757627 0.151297957 0.098855783 0.794677985 0.861802457 0.047336593 0.000406144 0.038619815 0.624972812 0.000042057 0.122096296 0.164777628 1.748008546 2.917877575 0.317431382 0.205438706 0.247606766 0.000004043 0.000126314 1.587898416 0.066268614 0.000000003 0.206183913 0.007161599 0.511363724 2.454274700 0.008687524 0.028150316 1.339369984 0.495815445 0.000151705 0.288374360 0.271295712 1.013151124 0.267301375 0.448600841 0.755729048 0.054964655 1.096424575 0.194266260 0.176385696 0.148303785 2.544488362 1.701033901 6.046581124 0.112826882 3.316530375 0.163353687 0.468190464 2.368885854 1.242997246 0.198126448 0.622044378 0.464054978 0.134032919 0.343192408 2.337059047 4.020889939 0.670555195 1.491002267 0.278078606 0.584773163 0.289812786 0.153289696 0.537244189 0.043287426 1.347962673 0.181657143 1.689339425 4.339335541 0.321734793 1.240912735 3.545664991 0.969459047 2.607601264 0.000000039 0.108743549 4.769405986 0.638288391 0.014069978 1.361098191 0.000014293 0.360464187 1.696921071 0.261003519 0.595292832 1.360350292 0.873474406 0.820020681 0.320165720 0.240749109 0.000444132 0.391168722 0.309294366 3.330483362 0.000000690 0.117474551 0.004739038 5.776768013 0.254553865 0.176687675 0.007906890 0.000000012 5.507033628 0.252535876 0.912779852 0.032527031 0.551032677 2.192208030 0.105684458 0.009471722 0.000891441 0.917345424 0.071520575 0.436447473 0.655307268 0.000214467 9.248852546 2.101408692 0.028879906 3.410962370 0.220695218 0.169421525 0.308399162 0.673616793 0.181497952 0.015499883 0.087410500 0.067617700 0.038148500 0.047184500 0.018526500 0.056550300 0.061613600 0.067940800 0.028499500 0.038803300 0.088741900 0.052224200 0.027273300 0.031676400 0.066367600 0.068080600 0.050229300 0.011378200 0.021297000 0.070436200