Protein HIGD2A

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	30.2100533159992	4.435e-06
Primates and Rodents clades	14.3275235767996	0.00632

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.241	0.254	0.505	0.283	0.278	0.439

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.479591836734694	0.0561224489795918	0	0	0	0	0.00510204081632653	0.459183673469388

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Empirical model for relative rates of amino acid substitutions (in PAML format)

0.000085718 0.000000054 0.000028033 0.485668508 0.000000097 18.408532735 0.135812662 2.831605344 0.482365512 0.000000050 1.172377782 3.479071584 0.000458193 0.000000063 0.000000008 0.503696232 0.127845470 0.000000006 14.818480324 0.000000008 1.308763401 1.029277088 0.670092550 0.778618406 3.944728336 1.670854539 0.099487418 0.920853165 0.151524105 13.547097918 22.779007534 0.000046511 0.000008153 26.331603387 0.000000006 0.000000011 0.000084028 0.000059896 0.000000764 0.000002221 0.850600372 0.000000008 0.278409421 0.248172529 0.000000021 0.043259665 0.098276679 0.000000007 0.057857986 0.000283220 0.000000002 0.000000033 0.000004498 0.000000009 4.909007062 0.181853561 4.935115186 4.831341979 1.633877174 0.000000008 2.610305415 1.071290027 0.000000002 1.716038689 0.000003494 0.099605292 0.804595967 0.001178258 0.000000006 0.000000005 0.000000008 0.831970432 0.000000002 0.000000002 0.000108461 0.231596070 5.595436564 0.982126657 0.252417591 0.000000002 0.680564681 0.000000005 2.242106787 0.000000002 0.000000002 0.045431848 0.000000009 0.317369418 2.811902895 0.000000002 0.000063101 0.895102336 0.709701491 0.000011021 0.000262191 0.000000008 0.953041775 0.221371589 0.317328001 1.713548434 0.000000002 0.386377189 0.008377152 0.000000187 0.184403697 1.687975864 0.459887126 6.423217509 1.461551485 3.559861945 0.000081215 0.004915711 2.177236906 0.000010959 0.001978594 1.302675284 0.771924886 0.000033902 0.134430684 4.449068306 3.598368338 0.000005225 0.625818922 0.000003710 0.204654405 0.312913992 0.000001173 0.006802008 0.000005132 1.639254069 0.000000667 0.000000057 0.642437560 0.000000380 0.613440946 6.513312847 0.000844575 71.914631742 0.000105980 0.000002373 0.000034994 20.016751741 0.001191430 0.000904371 0.000439499 0.000082625 0.006106793 0.004480461 0.030415922 0.000000150 0.109568957 34.972104110 0.000794700 0.811775102 0.003344972 2.054248187 0.000000005 3.849632768 0.000000002 0.000000002 0.000000002 10.816460950 0.000000015 0.018811106 0.000002156 0.163541480 3.902336634 0.000020682 0.518507549 0.000085760 0.007027276 3.875349227 0.403238437 0.352603007 0.565507157 0.000000025 0.000071942 0.000054071 0.302798367 0.149870976 4.295160350 1.668658602 0.000000002 4.536323708 1.591096501 0.089964962 0.000027506 0.166021510 0.002067415 0.009195896 0.112033000 0.054273100 0.015676100 0.019491000 0.013125200 0.046860800 0.044751000 0.066567400 0.011083200 0.043585800 0.078817800 0.046186100 0.035085900 0.053358800 0.106741000 0.070225400 0.077629700 0.001069790 0.021413900 0.082024300