Protein MRPL41

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	74.0978877713987	3.109e-15
Primates and Rodents clades	12.2261977459998	0.01575

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.315	0.422	0.264	0.395	0.36	0.244

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.428571428571429	0.102857142857143	0	0	0.00571428571428571	0	0.00571428571428571	0.457142857142857

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Empirical model for relative rates of amino acid substitutions (in PAML format)

0.787949462 0.441108683 1.197780372 0.568503326 0.175293853 8.689272364 13.910483765 4.151487583 0.000009255 0.000000138 0.649095404 3.746334568 1.746725007 0.004273490 0.000000144 2.632751764 0.076121235 0.931874166 7.000467045 0.000000016 5.861944488 1.168755299 1.251370836 1.243381957 0.894085512 0.659948571 0.000005203 0.610379200 0.000000002 14.526106723 3.448984470 0.000000003 0.000003653 8.926182350 0.000000001 0.000000001 0.000008739 0.000000085 1.120641919 0.000000003 10.104824391 0.000000002 0.000000001 0.000000002 0.000000013 0.653726460 0.453482697 0.000000003 0.000000003 0.002255438 2.075968622 0.000000001 0.000000001 4.042143819 2.731751504 0.000611250 5.270867743 0.625419126 0.131853886 0.000000016 3.898461209 1.082996422 0.110883885 0.778611630 0.400330787 0.000000001 0.206504735 1.868514317 0.000000003 0.000000003 10.352582273 1.240271461 0.000000001 0.000000001 4.541745740 1.658532189 4.781135392 0.172769321 0.000000318 0.053476840 0.210513508 0.000000071 8.434570444 0.000000002 0.000000001 0.000000001 3.978576329 1.382279907 1.446174367 0.000000001 0.000027580 1.931262614 0.308716211 0.304229107 0.241542664 4.997019173 1.439938359 0.213714237 0.172023076 0.138236134 0.000000005 0.657488197 0.533189421 0.008539686 0.053949506 4.292862346 1.314401290 8.843211983 1.251253237 16.303742197 0.056128401 0.008960040 3.049787159 0.000000326 0.000000029 0.554375622 0.238451606 0.000000012 0.062117205 1.588287755 6.072594609 0.062848240 0.000000043 0.563946955 0.000009727 1.509020885 0.000243480 0.141377355 0.000000013 4.700196039 0.032006250 0.084291275 2.130981205 0.000000002 0.109464346 6.530377490 0.000005521 3.088047147 0.000000003 0.000000003 40.312150240 0.000000002 0.000000001 1.562632702 0.000000013 0.000000005 0.000000001 0.000000001 3.809802628 3.138443023 0.000000002 0.000000026 0.000000002 0.000000001 0.000000001 3.809084330 0.000000003 4.983828811 0.000000002 0.000000001 0.498957805 16.223354981 1.576606052 0.208356999 0.000000001 0.000000005 2.559043181 0.000000002 0.647549244 0.000002737 0.000000017 3.489735965 0.296988131 0.000000003 0.000000003 0.075027169 0.000000025 0.233638490 0.247712349 0.000000013 21.640730976 2.591795404 0.058281056 0.530170993 1.161548736 0.093210686 0.000000006 1.072692919 0.000000017 0.000354905 0.083739000 0.076832700 0.030122200 0.035328500 0.006156010 0.040167900 0.077468400 0.077240800 0.007988360 0.022189500 0.077819800 0.094177600 0.021229000 0.064313100 0.063352500 0.049813200 0.063087300 0.005851770 0.032490400 0.070631900