Protein MRPL52

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	73.1994130654002	4.774e-15
Primates and Rodents clades	26.2154424373994	2.863e-05

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.185	0.293	0.522	0.265	0.339	0.396

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.543269230769231	0.0480769230769231	0	0.00961538461538462	0.00961538461538462	0.00480769230769231	0.00480769230769231	0.379807692307692

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Empirical model for relative rates of amino acid substitutions (in PAML format)

0.007449696 0.000034210 0.858366642 0.343166935 0.262718815 0.996204391 0.016589551 1.620763010 0.983674802 0.000000005 0.740528717 2.579264690 0.001042359 0.000000023 0.000106063 1.198962247 0.000000202 0.031991980 6.604773090 0.000000028 3.614840511 1.672311684 1.459625918 0.000525187 4.083422804 1.158061918 0.359139898 0.340260869 0.003556325 4.728873750 13.419771855 2.397908299 1.368753498 5.996111824 0.002443071 0.274589910 1.980864198 1.034933595 0.000976007 0.000002176 0.008123217 0.000013366 0.721539529 0.000361139 0.391643084 0.127792986 0.526818311 0.000000553 0.000000005 2.352188693 0.521820822 0.000000072 0.000000894 0.878505264 3.005421696 0.013376991 2.388620423 2.527681414 0.000006386 0.497731441 3.240657897 2.585136257 0.000000781 0.096863410 0.001354465 0.227276264 0.095849884 0.445850493 0.000045145 0.882062489 0.000299011 0.000000519 0.000021192 0.599902059 0.003066651 12.124442205 3.988726990 1.133643336 0.373297549 0.000000002 0.000000801 0.000000005 0.000065307 0.000000006 0.000000001 0.399372452 5.110075053 0.000211870 6.283690828 0.000000003 0.039304463 0.751689927 0.405086877 0.219286181 0.000000005 0.000000442 0.625993773 0.073461084 0.000031328 0.002818370 0.000000059 0.884935722 0.181421803 0.000000003 0.000000006 1.269949902 0.618128247 11.150773406 0.695509764 8.234938087 0.917975081 0.058757250 3.884054817 0.000091009 1.864859758 0.841719863 0.499741420 0.000390727 2.169279803 2.406698729 4.020468778 0.592443913 1.671792099 0.000894439 1.497271813 0.002246118 0.000007017 1.453776546 0.000072870 4.283832301 0.315956393 1.920021521 4.156621988 0.000006322 0.000053100 6.767066941 0.000000001 1.085500475 0.000000005 0.000000005 1.210136387 0.628638295 0.000000001 0.000000002 2.844506354 1.296855998 1.414917508 0.000000001 2.280188576 0.385767346 0.000000002 0.000000001 0.604979863 0.570627125 0.145107782 0.000000005 0.000000005 1.821855531 1.290038498 0.000000001 0.000000002 5.714182764 0.000000863 0.720660996 0.000000001 1.955944313 26.722944782 0.000000002 0.000000030 0.000000003 2.480265497 4.825568080 0.357069279 0.615776263 0.000016678 3.851749544 0.000015056 0.859950021 0.167784373 3.519580616 17.177762812 2.426411558 0.000211937 2.606314512 0.001092592 0.512746479 0.005996245 0.714918133 0.000000018 0.000000370 0.111780000 0.092418200 0.019601600 0.018348700 0.021974300 0.078237200 0.071790800 0.066162300 0.011378600 0.020639300 0.113102000 0.091074500 0.029335600 0.015938700 0.058220000 0.075365000 0.040547300 0.015186600 0.010624200 0.038275100