Protein MRPS28

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	42.6150726876003	1.244e-08
Primates and Rodents clades	19.4728127233993	0.0006344

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.253	0.285	0.462	0.286	0.292	0.422

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.295366795366795	0.055984555984556	0.00772200772200772	0.00386100386100386	0.00193050193050193	0.00772200772200772	0.0115830115830116	0.615830115830116

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Empirical model for relative rates of amino acid substitutions (in PAML format)

0.038148861 0.365842849 0.044285772 0.000103613 0.001357396 13.597058530 0.810647930 0.898142173 0.000000004 0.000000002 0.115516288 3.832579755 0.000640448 0.505762698 0.000000013 0.634871333 0.130216495 0.347390215 4.984348370 0.000000005 4.140736032 1.707977999 1.203978712 0.016513267 1.254094609 0.000000005 0.554701146 1.469008349 0.000699254 5.778137767 3.750079072 0.040193984 0.000000005 1.624253326 0.525951115 0.000004333 0.000015899 0.117012953 0.000006818 0.000000408 0.002015314 0.000004405 0.000000383 0.000000120 0.055667512 0.173712335 0.396899950 0.000004732 0.000001633 0.944389719 1.211019426 0.000345665 0.000080844 1.095685603 3.817910674 0.407627893 5.110529783 3.772360667 0.000124186 0.000000005 0.964773681 3.026131385 0.543581138 0.000000452 0.343114173 0.000010125 0.058932148 0.003606192 0.000000124 0.000000005 0.000002977 0.000007723 0.401520157 0.000000254 0.000003755 4.638914396 5.957265941 0.000003777 0.456119983 0.088984457 0.698378612 0.000000098 2.064328584 0.000000002 0.000000001 0.002461407 0.863136059 1.109316423 2.370197289 0.000000002 0.001905596 0.581184867 1.075517068 0.279631109 0.300283592 0.000000225 2.327280381 0.348098611 0.000065434 1.575131224 0.000008561 1.973959763 0.090469605 0.000009786 0.000000003 2.673797242 0.800044743 4.571472566 0.158774688 0.602436250 0.362363494 0.130149925 1.990157052 0.189291197 0.556092543 0.317178188 0.015697519 0.515485225 0.513760592 3.356198420 4.240095096 0.131491320 3.219062125 0.010534018 0.000001283 0.088504525 0.565590800 0.013943618 0.000027573 2.297087841 0.022818137 1.588840059 2.798154171 0.000004072 1.483367095 2.476119900 0.000298226 18.788489254 0.000028069 0.000000033 6.652364656 11.317357994 0.000001015 5.964977583 0.000001403 0.045782272 0.001543907 0.000005685 0.000130894 0.000001520 0.000057112 1.475330621 0.000071433 0.000000021 0.807774633 0.245481672 0.000000002 3.902854648 0.000000009 0.000000001 0.000000002 7.644628638 0.000000016 0.329926017 0.000000002 0.000000018 7.455565531 0.000000012 0.892026520 0.930465417 0.000008088 3.132378923 0.531271430 0.136438773 0.000000032 0.000000743 0.004161826 0.364186801 0.229029278 0.000219739 9.176372712 1.335848881 0.000002660 1.707440302 0.451813320 1.062388076 0.087697232 0.172236438 11.950586217 0.000000010 0.083032100 0.088953400 0.024028800 0.043477900 0.019694200 0.046087700 0.071282100 0.083552200 0.022995100 0.028968200 0.090344800 0.056181300 0.014389200 0.033526900 0.055339100 0.114028000 0.050724400 0.003870580 0.009613570 0.059910900