Protein NDUFV3

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	299.470662049993	0
Primates and Rodents clades	16.2073279549986	0.002753

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.08	0.184	0.736	0.087	0.321	0.591

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.251958224543081	0.287206266318538	0.0496083550913838	0.00652741514360313	0.00391644908616188	0.00261096605744125	0.00652741514360313	0.391644908616188

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Empirical model for relative rates of amino acid substitutions (in PAML format)

0.194871857 0.000391601 0.417344404 0.438860775 0.000209769 5.541780208 1.037571400 1.806701339 0.000274874 0.000054135 0.164322350 5.259000172 0.081590411 0.000325275 0.429724905 1.263488368 0.052301266 0.034797073 2.516498900 0.882089366 1.624687938 1.315039216 3.891805306 0.031059207 3.436824642 2.590570720 0.148461318 2.293253536 0.000140818 4.540588217 5.114354860 1.612787105 1.055929450 5.430051140 0.132890550 0.057351065 0.075397639 1.258864321 2.596268842 0.040136464 1.784895657 0.435286155 0.242289609 0.235907286 0.042191089 0.050999954 0.852191368 0.053548793 0.044435102 3.326240248 0.769347819 0.056729526 0.021283938 0.797475782 1.178901085 0.264617299 3.114693269 2.503119462 0.019960519 0.000362435 1.847050598 2.045383620 0.208871020 0.000037616 0.061234771 0.001109417 0.114821271 0.520348348 0.000435261 0.293911589 5.725547602 0.204548592 0.100668076 0.165822970 0.000000127 13.075737315 3.334372575 0.776948531 0.035910876 0.023729432 0.000081429 0.000000168 10.442437117 0.000007865 0.045380643 0.053935640 0.000000566 1.150852463 3.927571777 0.000000554 0.000084387 1.360467898 0.734103835 0.000157118 0.200118917 0.463664602 1.923814390 0.089997434 0.023473859 0.847223719 0.001250269 2.303888150 0.097856290 0.000645829 0.000296261 1.145548713 0.737498099 2.527149037 0.797617793 4.346948248 0.124351114 0.121661158 1.091439872 0.449032463 0.402913045 0.735920353 0.072015900 0.083384624 1.316846283 2.023301937 5.088203421 0.893597737 1.852503001 0.070467560 0.379388400 0.280841995 0.241268196 0.157091770 0.000284994 4.889774162 0.006574465 0.918013092 4.602625978 0.055479015 1.240547121 1.429961255 0.000366250 7.221590275 0.000000397 0.000000121 0.000895541 3.648241026 0.343351058 3.706361091 0.000008650 0.000014270 2.192426006 0.000046412 3.071980532 0.000001280 1.158474363 1.607400320 0.415810379 0.097880766 0.283408863 0.600205804 1.385720522 13.838995305 0.187010170 0.000000001 0.055659223 6.534169151 1.534804249 0.033938311 0.089043856 0.484723371 4.642693230 0.000000026 0.667796482 0.047672633 0.000000023 5.057180426 0.034403520 0.000074098 0.460663913 0.533903993 0.011655506 0.508165151 1.787160622 0.000000383 10.618406879 2.609466800 0.003015318 5.732433605 1.311394040 0.018240860 0.181649820 0.500173733 0.010939132 0.000023658 0.099474600 0.049318500 0.026238500 0.046503100 0.005601700 0.044622600 0.097414000 0.061436000 0.016702200 0.021537600 0.072168000 0.081988700 0.014752600 0.023531600 0.086825400 0.105563000 0.069359500 0.004273200 0.009764080 0.062925100