Protein SDHAF4

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	24.7487458947999	5.651e-05
Primates and Rodents clades	19.3632030259996	0.0006668

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.235	0.152	0.613	0.264	0.182	0.554

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.234567901234568	0.203703703703704	0.0123456790123457	0	0	0.0185185185185185	0.00617283950617284	0.524691358024691

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Empirical model for relative rates of amino acid substitutions (in PAML format)

0.012212373 1.787315176 0.000320891 0.328766618 0.000000001 3.096277911 0.920685021 1.597742565 0.000000138 0.000000002 0.011891825 1.391840618 0.007750364 0.000002122 0.000001258 0.003833569 0.000065496 0.003558162 1.800565701 0.000000006 1.820778796 0.624684846 1.218904971 1.283134211 1.042611565 1.285730695 0.518135544 1.192951496 0.007802978 2.858361920 15.810490927 0.517512426 2.548908237 9.622527632 0.000000033 0.858190058 0.018503869 0.243628387 0.008310992 0.000000002 0.005569911 0.000002940 0.000000013 0.000000005 1.274949690 0.198237597 0.529592842 0.158104909 0.000028863 0.633222683 1.584507708 0.035336687 0.010643379 0.566594073 1.368969305 0.000054036 2.146984568 0.902270944 0.091912696 0.000000006 2.817041158 0.829561826 0.000014018 0.000000025 0.257456513 0.000314062 0.005474377 0.975987268 0.012437596 0.000001249 0.000002195 0.000033070 0.000000016 0.808590955 0.000007868 8.201905218 3.178877719 0.939651328 0.000004765 0.115624701 2.366883682 0.000000002 0.000000054 0.005229785 0.000000001 0.000000005 0.019467402 0.880146985 3.874694007 0.017410355 0.006252617 1.001873851 0.103447536 0.033431827 0.000208163 0.000000006 1.891681210 0.121812348 0.000000282 2.286544452 0.000000018 1.378510250 0.136566465 0.000007924 0.003114022 3.914163418 0.562416482 4.188327145 0.033278682 1.991414066 0.420047993 0.000000028 1.106057483 0.165561406 0.401949154 1.225505271 0.019573880 3.240898688 1.486513086 2.188392663 7.014649363 0.369334326 0.383499624 0.110756572 2.528273280 0.564917830 0.552182479 0.000000036 0.002990076 0.450254628 0.015737021 0.949201583 9.301037534 0.000064915 0.091977211 2.244659865 0.041802448 2.463952108 0.008978354 0.000000002 4.175888170 0.000015657 0.000000001 0.921694694 0.814875258 0.000000022 1.667001571 0.000000001 0.000002879 0.000022133 0.220801614 0.009712938 0.000035331 0.000283935 1.083221975 1.170059786 0.000000002 9.879969217 1.734209570 0.558374944 0.000000626 4.733717436 0.000165448 0.064489456 0.000000881 2.788289594 2.333838785 0.000000011 3.193031921 0.193157840 0.000009713 6.187928684 0.204921648 0.296097667 0.083842142 0.027594388 0.000030937 0.522186413 0.272711881 0.000007537 19.531444092 4.282751692 0.336813289 1.034581935 0.067849403 0.013296116 0.559505639 2.049824830 0.000086937 1.750222477 0.073218200 0.076405300 0.030458700 0.042389900 0.017412200 0.027504000 0.069132400 0.067922600 0.018137500 0.025036500 0.090075500 0.091725300 0.013108000 0.031193200 0.082758000 0.100372000 0.054547100 0.016650200 0.016743300 0.055210300