Protein SLIRP

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	138.243441234201	0
Primates and Rodents clades	74.2372951888001	2.887e-15

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.167	0.311	0.522	0.255	0.221	0.524

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.315972222222222	0.0694444444444444	0.00347222222222222	0	0	0.00347222222222222	0.00347222222222222	0.604166666666667

Loading ...

Empirical model for relative rates of amino acid substitutions (in PAML format)

0.310428846 0.000070396 0.976663357 0.856639201 0.000228881 5.994681192 0.692978528 1.671918989 0.000000082 0.000000046 0.005284391 3.008462492 1.393597602 0.024794069 0.000427244 0.998066679 0.025734921 0.218991118 4.366770071 0.000000012 2.020535217 2.238112375 1.451806637 0.001590154 1.796324606 1.970395488 0.006386247 1.066112254 0.218257123 0.967451774 1.703278182 1.005789800 1.230968099 3.931918141 0.277504569 0.000020118 0.004750949 0.000072142 0.837633480 0.000000251 0.829436168 0.073479780 0.000000085 0.100288816 0.000336067 0.274137224 0.005872704 0.090183242 0.154410473 0.000052729 0.415388319 0.000000292 0.088652690 0.525500311 3.206601786 0.072804509 7.829976225 2.437641062 0.001192880 0.000000817 0.491237407 1.115737262 0.001386424 0.016283274 0.118287163 0.097392877 1.113239485 0.611151412 0.825074213 0.000000244 0.000000306 0.138978899 0.000000131 0.000001346 0.000023663 2.135740176 4.939197538 0.185909351 0.065221662 0.094902979 0.000133231 0.388621417 2.163257699 0.268886599 0.000000229 0.000000025 0.001273609 0.596869179 1.941703295 0.296631520 0.111154061 1.554817192 1.817252311 0.088081380 0.491864996 0.000000222 0.864009450 0.213792989 0.000687268 3.145856274 0.108558549 1.318957357 0.039382249 0.001269676 0.117028774 2.711273942 1.069994545 5.653011950 0.351281797 0.000035341 0.009196105 0.353124277 2.109879479 0.324274668 0.232387134 0.634397018 0.567451119 0.000092806 0.315200147 2.594851048 3.941757649 0.512870064 3.214000362 0.165257228 0.000003268 0.267437899 0.268297956 0.610726372 1.027415378 3.750760507 0.454142587 0.062229755 2.826426197 0.163425460 0.990874239 5.832596768 0.000000344 1.493545146 0.000000005 0.000000002 0.000000012 0.000019311 0.001015923 0.000000009 0.561126538 0.000000028 1.456483129 0.000000005 0.000000023 0.225225030 0.015214442 0.992251248 0.000001062 0.001532670 0.000151196 2.749683613 3.644745006 1.819499056 2.068276146 0.000018737 0.000752199 12.599912625 0.000645826 0.639293225 0.000170488 0.000188814 3.992368197 0.006685391 0.003070586 0.717478522 0.000000210 3.279961250 0.027336297 0.002298364 0.016983100 0.524047954 0.000528124 0.080729908 0.030842248 0.145346687 12.751284346 3.415057257 0.000293278 5.066565809 0.569593026 0.002105996 0.267129176 0.296172179 0.693531282 0.660132530 0.095586800 0.084502300 0.034293400 0.040295000 0.008316300 0.071029200 0.066148100 0.057268200 0.033419200 0.042570300 0.058106200 0.070533300 0.016789400 0.059881000 0.047656300 0.074218400 0.042671800 0.013710600 0.010427800 0.072576200