Protein TOMM40

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	171.606797136199	0
Primates and Rodents clades	129.4172567184	0

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.261	0.415	0.324	0.394	0.318	0.288

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.353846153846154	0.116083916083916	0.027972027972028	0.0125874125874126	0.00839160839160839	0.0027972027972028	0.0041958041958042	0.474125874125874

Loading ...

Empirical model for relative rates of amino acid substitutions (in PAML format)

0.554127237 0.151720568 0.953721402 0.617760205 0.040213077 3.085010404 0.918240746 3.663110870 1.284042238 0.000006061 0.751018192 3.299715717 0.584382261 0.759304693 0.081474176 0.603852016 0.486722621 0.032432590 12.155845613 0.365532520 1.919885616 2.003607962 2.436418032 0.268212531 1.095171442 2.100150791 0.528860295 0.671318401 0.041531798 2.456293489 2.512065696 0.280630590 2.480293577 5.085298760 0.020276656 0.001620637 0.033379894 0.000394111 1.523905841 0.001227415 1.406820602 0.139608997 0.000017634 0.000717390 1.183989842 0.120905161 0.525190199 0.000003988 0.149465520 0.003281421 0.473999294 0.117542164 0.184727498 0.742770482 2.119762209 0.159645113 8.178611074 1.298717520 0.432699771 0.200002144 1.863605796 2.623795548 0.186954750 0.000006102 0.000016830 0.136364902 0.607104466 0.000550185 0.000063468 0.405656231 0.000503191 0.273762225 0.348027010 0.033450139 0.000015724 6.575767594 4.660948069 0.000563489 0.205025685 0.116633004 0.000000018 0.000000004 2.711853869 0.000289389 0.365436397 0.167790066 0.432543938 1.790661103 2.808725424 0.000000032 0.587583620 2.184690663 1.238269934 0.165717175 0.016608600 0.548469581 1.639649905 0.560388886 0.685994797 0.728430348 0.317834029 1.123542129 0.736930123 0.594952589 0.041910941 2.609947358 1.087015026 4.608125609 0.558552773 3.879481737 0.194308161 0.176041015 2.169887909 0.000905739 0.123918787 0.416421871 0.129981680 0.110754194 0.510342291 3.240872510 4.149552668 0.451379450 1.121779854 0.197384804 0.106188138 0.765240331 0.664283931 0.443129234 0.358545526 2.416318945 0.301382484 0.970211986 2.832822757 0.000000483 0.549826567 4.607369704 0.525404064 2.984513334 0.000000880 0.000000042 3.593922632 2.516158772 0.000122725 0.579333361 0.000000150 0.000012026 1.467103371 0.000000247 0.736013338 1.253756978 0.597467747 0.772198419 0.004424782 0.043106859 0.387069176 0.513096433 0.212405737 5.881475605 0.144899934 0.030982823 0.000000034 1.608338456 0.537034224 0.105945610 0.100338655 0.460331354 4.899467537 0.000000268 0.423617522 0.153751603 1.966783303 2.593264737 0.171994044 0.003985705 0.366966042 2.277262040 0.120312659 0.302319026 0.219674031 0.000045533 11.291737775 3.142961856 0.003579299 6.332728978 0.635565344 0.181071855 0.214689237 0.520485141 0.016791134 0.175335678 0.083260300 0.036935000 0.041232600 0.032077900 0.013992900 0.050112100 0.040443700 0.098911100 0.022287100 0.033575700 0.107777000 0.038210000 0.023992500 0.041862100 0.072939000 0.079726400 0.069884800 0.010088300 0.025165500 0.077526400