Protein UQCC2

Heterotachy (covarion) test results

Clades tested	Log Lh difference	p-value of difference
All clades	33.2700022812005	1.052e-06
Primates and Rodents clades	10.3585840457999	0.0348

Alignment variation features

Conservative sites proportion	Intermediate sites proportion	Variable sites proportion	Conservative sites heterotachy weight	Intermediate sites heterotachy weight	Variable sites heterotachy weight
0.317	0.419	0.264	0.419	0.38	0.201

Site diversity ≤ 0.125	0.125 < Site diversity ≤ 0.25	0.25 < Site diversity ≤ 0.375	0.375 < Site diversity ≤ 0.5	0.5 < Site diversity ≤ 0.625	0.625 < Site diversity ≤ 0.75	0.75 < Site diversity ≤ 0.875	Site diversity > 0.875
0.726190476190476	0.0654761904761905	0.0119047619047619	0	0	0.00595238095238095	0	0.19047619047619

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Empirical model for relative rates of amino acid substitutions (in PAML format)

0.000016348 0.006756047 0.000177048 0.000085236 0.000000007 6.318794690 0.000000001 1.565743377 0.000000005 0.000000002 1.743888293 2.145561727 0.402500285 0.000000375 0.000000007 1.039071638 0.000005131 0.907305454 8.693366690 0.000000007 4.048746454 1.151846097 0.840495598 0.000000020 2.704624602 2.870656570 1.052611089 1.175310951 0.000000082 1.249210308 11.081317511 0.000002720 0.000000007 5.544996643 0.000816486 0.000000002 0.004930840 0.485959896 2.598960710 0.000000002 0.000000007 0.000000062 0.000000001 1.181412294 0.000000035 0.435469908 0.561130346 0.000000005 0.000000002 0.000000007 0.000018883 0.032771267 0.000000002 0.821245943 5.477017030 0.000014008 4.001306581 1.555886772 0.244542005 0.000006676 1.903596276 0.729849538 0.053635985 0.150830818 0.000008138 0.000000002 0.013940139 1.323113149 0.000000005 0.000000002 0.000000007 1.458384639 0.000000001 0.000004462 0.000000006 14.381531834 3.650660658 0.062902089 0.016846011 0.067083289 0.000000005 0.000000002 0.000000007 0.000000002 0.000000001 0.000000002 1.340988554 1.457855468 3.672195579 0.000000001 0.533505001 2.768622072 1.139566223 0.000000159 0.474304655 0.000000007 0.742480146 0.330695830 0.000000050 3.269842264 0.000000210 1.707989248 0.000000169 0.000000003 0.000000003 4.392416206 0.245261849 8.932042066 0.000000017 0.000000045 0.821303828 0.000000005 4.455120191 0.000000053 0.000035743 0.596191851 0.576505450 0.000023466 0.000000009 5.088478833 4.047101423 0.040730352 1.639367488 0.000000002 0.000000007 1.225891961 0.084993390 0.523872796 1.226991629 0.311877715 0.423481788 1.247954559 4.525525947 0.959942741 0.045875831 7.854928783 1.500477848 4.944137000 0.000000005 0.000000002 0.000000176 0.000000002 0.000000001 0.000000002 0.000000006 0.000003760 0.000000617 0.435099097 0.000000008 2.976935902 0.000000003 0.000000028 0.000000033 0.024795912 0.000000724 0.000000106 1.111853905 6.060069040 0.000000215 0.048046065 0.000000002 4.396423894 0.000000005 0.401050849 0.266114868 0.000000003 5.414648145 0.000000002 1.312258253 0.967826662 2.373530908 8.404511951 0.102746076 0.002143713 0.000000223 0.000000007 0.000022437 0.674443075 0.012684073 0.000000010 12.564477726 7.132753437 0.000363772 6.367139159 0.633591385 0.000004080 0.356574313 0.888665848 0.000001389 0.000000044 0.082243800 0.097506400 0.021033600 0.041091100 0.014513300 0.045722300 0.111191000 0.041995500 0.017561000 0.022007600 0.072208300 0.096617300 0.037009400 0.029270600 0.047836300 0.071071300 0.061373800 0.014941200 0.028644100 0.046162500